RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 DGKKQ5KSL6 1271 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 LEO1Q8WVC0 666 aaPredicted RBP29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 PKMYT1Q99640 499 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 INTS13Q9NVM9 706 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 GDAP2Q9NXN4 497 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 SPTBN2O15020 2390 aa29.02■■■□□ 2.24
SNRPA1-215ENST00000561187 OTOL1A6NHN0 477 aaPredicted RBP29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 K7ESF4 209 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 TNNC2P02585 160 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 WEE1P30291 646 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 HOXD13P35453 343 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 RPL10AP62906 217 aaKnown RBP29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 CCINQ13939 588 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 PKN3Q6P5Z2 889 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 STXBP4Q6ZWJ1 553 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 NELFCDQ8IXH7 590 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 TOP6BLQ8N6T0 577 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 RDH13Q8NBN7 331 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 HPDLQ96IR7 371 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 TDP1Q9NUW8 608 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 NCOR2Q9Y618 2525 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 ATG2BQ96BY7 2078 aa29.01■■■□□ 2.23
SNRPA1-215ENST00000561187 ZNF233A6NK53 670 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 SPEM2Q0P670 501 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 MYO1EQ12965 1108 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 SIM2Q14190 667 aaPredicted RBP29■■■□□ 2.23
SNRPA1-215ENST00000561187 NAIF1Q69YI7 327 aaPredicted RBP29■■■□□ 2.23
SNRPA1-215ENST00000561187 SHC4Q6S5L8 630 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 MAMSTRQ6ZN01 415 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 MYLPFQ96A32 169 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 ZNF396Q96N95 335 aaPredicted RBP29■■■□□ 2.23
SNRPA1-215ENST00000561187 SYT15Q9BQS2 421 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 KBTBD4Q9NVX7 518 aa29■■■□□ 2.23
SNRPA1-215ENST00000561187 CLIC2O15247 247 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 DLATP10515 647 aaKnown RBP28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 LMO2P25791 158 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 DDX6P26196 483 aaKnown RBP eCLIP28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 PCSK1P29120 753 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 CYP2J2P51589 502 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 RUNX3Q13761 415 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 CC2D1AQ6P1N0 951 aaPredicted RBP28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 KBTBD7Q8WVZ9 684 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 SLC22A12Q96S37 553 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 FAM83CQ9BQN1 747 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 BLZF1Q9H2G9 400 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 ABCB6Q9NP58 842 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 DLL3Q9NYJ7 618 aa28.99■■■□□ 2.23
SNRPA1-215ENST00000561187 HRO43593 1189 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 NOL4O94818 638 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 PDGFRBP09619 1106 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 LHX1P48742 406 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 PXNP49023 591 aaPredicted RBP28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 FAM26FQ5R3K3 315 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 MON1AQ86VX9 555 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 CHFRQ96EP1 664 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 CYP2S1Q96SQ9 504 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 MMS19Q96T76 1030 aa28.98■■■□□ 2.23
SNRPA1-215ENST00000561187 GABRDO14764 452 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 PPP6R2O75170 966 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 CKMP06732 381 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 FSTL4Q6MZW2 842 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 LRRC27Q9C0I9 530 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 KIF9Q9HAQ2 790 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 CRTAC1Q9NQ79 661 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 AGPAT3Q9NRZ7 376 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 POLR3BQ9NW08 1133 aaPredicted RBP28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 UXTQ9UBK9 157 aaPredicted RBP28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 ZMYM5Q9UJ78 669 aa28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 DYNC1LI1Q9Y6G9 523 aaKnown RBP28.97■■■□□ 2.23
SNRPA1-215ENST00000561187 SDK1Q7Z5N4 2213 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 KIAA0391O15091 583 aaKnown RBP28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 CUTAO60888 179 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 TGM1P22735 817 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 CYP27A1Q02318 531 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 MTF1Q14872 753 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 DUOXA2Q1HG44 320 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 LAIR1Q6GTX8 287 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 LONP2Q86WA8 852 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 CCDC127Q96BQ5 260 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 CDV3Q9UKY7 258 aaKnown RBP28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 WNT6Q9Y6F9 365 aa28.96■■■□□ 2.23
SNRPA1-215ENST00000561187 C2orf78A6NCI8 922 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 EIF3DO15371 548 aaKnown RBP eCLIP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 EGFP01133 1207 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 BDNFP23560 247 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 AMPD3Q01432 767 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 LMNB2Q03252 620 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 SNRNP35Q16560 246 aaKnown RBP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 CFAP221Q4G0U5 840 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 CEP68Q76N32 757 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 EPM2AIP1Q7L775 607 aaPredicted RBP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 WDR49Q8IV35 697 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 GPR161Q8N6U8 529 aaKnown RBP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 ARL14EPQ8N8R7 260 aaPredicted RBP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 IQUBQ8NA54 791 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 MRPL45Q9BRJ2 306 aaKnown RBP28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 CUEDC2Q9H467 287 aa28.95■■■□□ 2.22
SNRPA1-215ENST00000561187 TRAV19A0A0A6YYK7 116 aa28.94■■■□□ 2.22
SNRPA1-215ENST00000561187 POLR2DO15514 142 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms