RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 STK25O00506 426 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 NOL4O94818 638 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 STAU1O95793 577 aaKnown RBP13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 BDNFP23560 247 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 NR2F2P24468 414 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 LHX1P48742 406 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 MRE11P49959 708 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 NUCB2P80303 420 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 FZD5Q13467 585 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 BIRC3Q13489 604 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 NCOA4Q13772 614 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 VEPH1Q14D04 833 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 ZACNQ401N2 412 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 TXNDC8Q6A555 127 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 SV2AQ7L0J3 742 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 MAML2Q8IZL2 1156 aaPredicted RBP13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 GUF1Q8N442 669 aaKnown RBP13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 TTC8Q8TAM2 541 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 CHFRQ96EP1 664 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 ABCB6Q9NP58 842 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 PCDHA5Q9Y5H7 936 aa13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
CHRNA3-208ENST00000561128 TRIM49BA6NDI0 452 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TACC1O75410 805 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 BMP6P22004 513 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 PCSK1P29120 753 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 HOXC13P31276 330 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 PRCPP42785 496 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 ASPAP45381 313 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TNNC1P63316 161 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 FAM160A1Q05DH4 1040 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TNK2Q07912 1038 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 UBXN2BQ14CS0 331 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 ANGPT1Q15389 498 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 NFIL3Q16649 462 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 NAIF1Q69YI7 327 aaPredicted RBP13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 ISM2Q6H9L7 571 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TXNDC11Q6PKC3 985 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 PAQR9Q6ZVX9 377 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 ITIH5Q86UX2 942 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 SPATA2LQ8IUW3 424 aaPredicted RBP13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 MAB21L3Q8N8X9 362 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 OR6B3Q8NGW1 331 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TWNKQ96RR1 684 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TRMT61BQ9BVS5 477 aaKnown RBP13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 TASP1Q9H6P5 420 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 BRD9Q9H8M2 597 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 VRTNQ9H8Y1 702 aa13.53□□□□□ -0.24
CHRNA3-208ENST00000561128 KANSL1LA0AUZ9 987 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 C2orf78A6NCI8 922 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 OTOL1A6NHN0 477 aaPredicted RBP13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 CALUO43852 315 aaPredicted RBP13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 PHACTR2O75167 634 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 PSMC3P17980 439 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 MAGEA11P43364 429 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 GCLMP48507 274 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 VAMP7P51809 220 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 CYP27A1Q02318 531 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 FCHO2Q0JRZ9 810 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 SMARCB1Q12824 385 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 TRPC3Q13507 836 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 MFSD6LQ8IWD5 586 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 MYCBPAPQ8TBZ2 947 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 SEMA4DQ92854 862 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 DNASE1L2Q92874 299 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 USP13Q92995 863 aaPredicted RBP13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
CHRNA3-208ENST00000561128 F8VP50 259 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CSH1P0DML2 217 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CSH2P0DML3 217 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CCDC130P13994 396 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 PTPN1P18031 435 aaKnown RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 RFX1P22670 979 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 CDC25CP30307 473 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ATICP31939 592 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 GNL1P36915 607 aaPredicted RBP13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 PIK3CAP42336 1068 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 ZXDBP98169 803 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 PRKCQQ04759 706 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 TRIM68Q6AZZ1 485 aa13.51□□□□□ -0.25
CHRNA3-208ENST00000561128 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms