RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RPL7AP62424 266 aaKnown RBP17.28■□□□□ 0.36
TPM1-228ENST00000560975 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 PTK7Q13308 1070 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 HSF5Q4G112 596 aaPredicted RBP17.28■□□□□ 0.36
TPM1-228ENST00000560975 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 TXNRD3NBQ6F5E7 133 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 MON1BQ7L1V2 547 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 NME8Q8N427 588 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 KCTD17Q8N5Z5 321 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 ACSS3Q9H6R3 686 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
TPM1-228ENST00000560975 PLA2G4CQ9UP65 541 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 IVNS1ABPQ9Y6Y0 642 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 WNK3Q9BYP7 1800 aa17.28■□□□□ 0.36
TPM1-228ENST00000560975 ZNF862O60290 1169 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 KLHL38Q2WGJ6 581 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 CDC42EP5Q6NZY7 148 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 ACAD11Q709F0 780 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 RILPQ96NA2 401 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 ACAP3Q96P50 834 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 IL1RAPL1Q9NZN1 696 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 CAPN14A8MX76 684 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 PDLIM1O00151 329 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 PFDN1O60925 122 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 ETV4P43268 484 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 VCPP55072 806 aaKnown RBP17.27■□□□□ 0.36
TPM1-228ENST00000560975 AQP4P55087 323 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 GDF10P55107 478 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 ASPHQ12797 758 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 DLG1Q12959 904 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 UBAP2LQ14157 1087 aaKnown RBP17.27■□□□□ 0.36
TPM1-228ENST00000560975 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.27■□□□□ 0.36
TPM1-228ENST00000560975 USP6NLQ92738 828 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 ALKBH8Q96BT7 664 aaKnown RBP17.27■□□□□ 0.36
TPM1-228ENST00000560975 TRIM11Q96F44 468 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 TEKT3Q9BXF9 490 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 PPCSQ9HAB8 311 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 TAGLN3Q9UI15 199 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 IKBKGQ9Y6K9 419 aa17.27■□□□□ 0.36
TPM1-228ENST00000560975 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.35
TPM1-228ENST00000560975 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.35
TPM1-228ENST00000560975 PRR5-ARHGAP8B1AHC4 643 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 PABPC4LP0CB38 370 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 ATP2B4P23634 1241 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 TTLL12Q14166 644 aaPredicted RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 MAP7Q14244 749 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 SPOPLQ6IQ16 392 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 SLC26A7Q8TE54 656 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 IQCGQ9H095 443 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 TMCO1Q9UM00 188 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CCDC160A6NGH7 325 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 SORBS2O94875 1100 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 HIRAP54198 1017 aaPredicted RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 EPHB1P54762 984 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 AQP5P55064 265 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 TMPRSS15P98073 1019 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 SLC25A3Q00325 362 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 PDE1BQ01064 536 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CEP55Q53EZ4 464 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 SPOCD1Q6ZMY3 1216 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CDHR3Q6ZTQ4 885 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 PDSS2Q86YH6 399 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 C12orf56Q8IXR9 622 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 APOPT1Q96IL0 206 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 I3L4J1 428 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 FAM155BO75949 473 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 DHRS4L1P0CG22 281 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 RCOR2Q8IZ40 523 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 STKLD1Q8NE28 680 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 JDP2Q8WYK2 163 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CPT1BQ92523 772 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 CCDC124Q96CT7 223 aaKnown RBP17.26■□□□□ 0.35
TPM1-228ENST00000560975 CCDC17Q96LX7 622 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 DHRS4Q9BTZ2 278 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 C1orf112Q9NSG2 853 aa17.26■□□□□ 0.35
TPM1-228ENST00000560975 PENKP01210 267 aaPredicted RBP17.25■□□□□ 0.35
TPM1-228ENST00000560975 ASLP04424 464 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 PEX2P28328 305 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 BST1Q10588 318 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 MSLNQ13421 630 aaPredicted RBP17.25■□□□□ 0.35
TPM1-228ENST00000560975 NCOA4Q13772 614 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 OASLQ15646 514 aaKnown RBP17.25■□□□□ 0.35
TPM1-228ENST00000560975 RNF111Q6ZNA4 994 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 CHSY1Q86X52 802 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 CCDC28BQ9BUN5 200 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 WDR11Q9BZH6 1224 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 MIS12Q9H081 205 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 S100A14Q9HCY8 104 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
TPM1-228ENST00000560975 NYAP2Q9P242 653 aa17.25■□□□□ 0.35
TPM1-228ENST00000560975 COQ4Q9Y3A0 265 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms