RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 LRRC3Q9BY71 257 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 BRD8Q9H0E9 1235 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 INTS2Q9H0H0 1204 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 VPS16Q9H269 839 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 BLZF1Q9H2G9 400 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 WDR6Q9NNW5 1121 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 SETD4Q9NVD3 440 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RBAKQ9NYW8 714 aaPredicted RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 AFF4Q9UHB7 1163 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 SCML2Q9UQR0 700 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 LUC7L2Q9Y383 392 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 C19orf67A6NJJ6 358 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TNFRSF10BO14763 440 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 KRT86O43790 486 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 MGEA5O60502 916 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 USO1O60763 962 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RNF40O75150 1001 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PCK1P35558 622 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 NDUFV1P49821 464 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CDR2Q01850 454 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TDRD10Q5VZ19 366 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 AFMIDQ63HM1 303 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 CREG2Q8IUH2 290 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 C1orf127Q8N9H9 656 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TNIP3Q96KP6 325 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TBCBQ99426 244 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ELOVL4Q9GZR5 314 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RNF208Q9H0X6 261 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 FAM204AQ9H8W3 233 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TAB2Q9NYJ8 693 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 UXTQ9UBK9 157 aaPredicted RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 GDAQ9Y2T3 454 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 MYH10P35580 1976 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 RCCD1A6NED2 376 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ARL5CA6NH57 179 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 SMAPO00193 183 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 GCNT3O95395 438 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 FGBP02675 491 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 THP07101 528 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 STAT1P42224 750 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 MYL7Q01449 175 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 KCNH2Q12809 1159 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 DRP2Q13474 957 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PPP2R5EQ16537 467 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 DUSP6Q16828 381 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TADA2BQ86TJ2 420 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 DCP1BQ8IZD4 617 aaKnown RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 EFHBQ8N7U6 833 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 DNAJB3Q8WWF6 145 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 BCAS3Q9H6U6 928 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 NHEJ1Q9H9Q4 299 aaPredicted RBP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.76□□□□□ -1.49
ZEB1-219ENST00000560721 TRIM10Q9UDY6 481 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 PCDHGC5Q9Y5F6 944 aa5.76□□□□□ -1.49
ZEB1-219ENST00000560721 ZNF263O14978 683 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 IFNAR2P48551 515 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 ARSEP51690 589 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 VAV2P52735 878 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 PLK1P53350 603 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 NLRP11P59045 1033 aaKnown RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 TLE2Q04725 743 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 STRADAQ7RTN6 431 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 RHOT2Q8IXI1 618 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 C12orf50Q8NA57 414 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 SUSD6Q92537 303 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 IGSF21Q96ID5 467 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 DEFB118Q96PH6 123 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 IFIH1Q9BYX4 1025 aaKnown RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 OSBPL6Q9BZF3 934 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 LACRTQ9GZZ8 138 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 AGO3Q9H9G7 860 aaKnown RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 CNGB3Q9NQW8 809 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 DPP3Q9NY33 737 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 USTQ9Y2C2 406 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 STXBP5LQ9Y2K9 1186 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 JRKLQ9Y4A0 524 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 IGLV3-10A0A075B6K4 115 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 CCDC189A1A4V9 331 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 TRIM49BA6NDI0 452 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 LACTBL1A8MY62 500 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 SLC16A4O15374 487 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 NMT1P30419 496 aaKnown RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 HOXA6P31267 233 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 CYLC1P35663 651 aaPredicted RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 BMPR1AP36894 532 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 OXCT1P55809 520 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 SLC7A9P82251 487 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 SLC4A8Q2Y0W8 1093 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 HSP90B2PQ58FF3 399 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 VARS2Q5ST30 1063 aaKnown RBP5.75□□□□□ -1.49
ZEB1-219ENST00000560721 CCDC122Q5T0U0 273 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 ALG1LQ6GMV1 187 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 FOXR1Q6PIV2 292 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 GLB1LQ6UWU2 654 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 CXCL17Q6UXB2 119 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 SV2AQ7L0J3 742 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 BHLHA9Q7RTU4 235 aa5.75□□□□□ -1.49
ZEB1-219ENST00000560721 METTL3Q86U44 580 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms