RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SOAT2O75908 522 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 FGF19O95750 216 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 SP9P0CG40 484 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 MYL4P12829 197 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ACAT1P24752 427 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 LMO2P25791 158 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 PRCPP42785 496 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ADAM9Q13443 819 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 TRPC3Q13507 836 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 UBXN2BQ14CS0 331 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 WDR72Q3MJ13 1102 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 MGAT5BQ3V5L5 792 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 CFAP221Q4G0U5 840 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ZNF852Q6ZMS4 543 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 INTS8Q75QN2 995 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ITIH5Q86UX2 942 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 SHKBP1Q8TBC3 707 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 IRF7Q92985 503 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 CLDN23Q96B33 292 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 FUBP3Q96I24 572 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 MKNK1Q9BUB5 465 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 TRMT61BQ9BVS5 477 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 ABI2Q9NYB9 513 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
SNRPA1-210ENST00000560383 HCRTO43612 131 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 KINO60870 393 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 LRRN2O75325 713 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 VNN1O95497 513 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 LMNAP02545 664 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 PSMC3P17980 439 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 PSMC2P35998 433 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 BIRC3Q13489 604 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 NCOA4Q13772 614 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 VITQ6UXI7 678 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 ZC3H3Q8IXZ2 948 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 MAML2Q8IZL2 1156 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 ADSSL1Q8N142 457 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 ZSCAN18Q8TBC5 510 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 MMS19Q96T76 1030 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 SEPT5Q99719 369 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 IER2Q9BTL4 223 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 BRD9Q9H8M2 597 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 ZNF334Q9HCZ1 680 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 HEBP1Q9NRV9 189 aa16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 MTF2Q9Y483 593 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-210ENST00000560383 MYBPHLA2RUH7 354 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 SHISA7A6NL88 538 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 MAN2B1O00754 1011 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 LAMTOR5O43504 91 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 PHACTR2O75167 634 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 VAMP7P51809 220 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 MLLT6P55198 1093 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 TNNC1P63316 161 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 GRM2Q14416 872 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 VEPH1Q14D04 833 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 CCDC142Q17RM4 750 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 GAREM2Q75VX8 874 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 FAM186BQ8IYM0 893 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 MSANTD3Q96H12 275 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 ZSWIM3Q96MP5 696 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 LPIN3Q9BQK8 851 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 SYT15Q9BQS2 421 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 MRPL45Q9BRJ2 306 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 IL21Q9HBE4 155 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 CRTAC1Q9NQ79 661 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 SPATA6Q9NWH7 488 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 NME7Q9Y5B8 376 aa16.22■□□□□ 0.19
SNRPA1-210ENST00000560383 KIF26AQ9ULI4 1882 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 A0A1W2PRU2 124 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 ASS1P00966 412 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 HMGA1P17096 107 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 CD72P21854 359 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 GNL1P36915 607 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 MAGEA11P43364 429 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 UBE2HP62256 183 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 TEAD2Q15562 447 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 MAPRE1Q15691 268 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 SGSM1Q2NKQ1 1148 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 ZNF699Q32M78 642 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 C1orf228Q6PIY5 440 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 TAF4BQ92750 862 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 PI4K2AQ9BTU6 479 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 SLITRK6Q9H5Y7 841 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 MAN1B1Q9UKM7 699 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 R4GN57 208 aa16.21■□□□□ 0.19
SNRPA1-210ENST00000560383 F5P12259 2224 aa16.21■□□□□ 0.18
SNRPA1-210ENST00000560383 NCANO14594 1321 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 DENND4CQ5VZ89 1909 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 ARNTLO00327 626 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 CETN3O15182 167 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 ATP2C2O75185 946 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 KRT13P13646 458 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 GJA1P17302 382 aa16.2■□□□□ 0.18
SNRPA1-210ENST00000560383 CYP2F1P24903 491 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms