RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 APOL5Q9BWW9 433 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ADAM33Q9BZ11 813 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 TRIM4Q9C037 500 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CCDC90BQ9GZT6 254 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 WWP1Q9H0M0 922 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CHMP2BQ9UQN3 213 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 AKR1A1P14550 325 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 WARS2Q9UGM6 360 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 SNX5Q9Y5X3 404 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CSE1LP55060 971 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 RGS9BPQ6ZS82 235 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ITIH5Q86UX2 942 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ATP6V1G3Q96LB4 118 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 C9orf72Q96LT7 481 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 SPAG6O75602 509 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 VDRP11473 427 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 IL10P22301 178 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 KLK7P49862 253 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 EIF2B5Q13144 721 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 MTM1Q13496 603 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CBWD2Q8IUF1 395 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 BLOC1S5Q8TDH9 187 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CIPCQ9C0C6 399 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 YY1AP1Q9H869 796 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 SMG5Q9UPR3 1016 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ADM5C9JUS6 153 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CHUKO15111 745 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 CSDE1O75534 798 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 ATP8B4Q8TF62 1192 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 WDR24Q96S15 920 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 TMEM161AQ9NX61 479 aa14.01□□□□□ -0.17
TRAF3-208ENST00000560371 AFDNP55196 1824 aaKnown RBP14.01□□□□□ -0.17
TRAF3-208ENST00000560371 A0A1W2PQJ5 194 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FDPSP14324 419 aaKnown RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 ORC1Q13415 861 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 GRIK4Q16099 956 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 RUBCNQ92622 972 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 EIF2AQ9BY44 585 aaKnown RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 KLRC2P26717 231 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FAM118BQ9BPY3 351 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 VTA1Q9NP79 307 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 TAF6LQ9Y6J9 622 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FRMD3A2A2Y4 597 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 POMCP01189 267 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 MAP3K7CLP57077 242 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 SLFN11Q7Z7L1 901 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FAM161BQ96MY7 647 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 KIF2CQ99661 725 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 CBWD1Q9BRT8 395 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 CHST12Q9NRB3 414 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 PSMC3IPQ9P2W1 217 aaPredicted RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 VWA5AO00534 786 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 GRIN1Q05586 938 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 GJB7Q6PEY0 223 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 TLK2Q86UE8 772 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FAM71DQ8N9W8 422 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 OR9Q1Q8NGQ5 310 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 ARL8AQ96BM9 186 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 IRX2Q9BZI1 471 aaPredicted RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 FAM129AQ9BZQ8 928 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 TCP11X1B4DZS4 312 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 ACADMP11310 421 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 FBXO47Q5MNV8 452 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 TAF2Q6P1X5 1199 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 ZNF669Q96BR6 464 aaPredicted RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 MYH10P35580 1976 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 HEATR9A2RTY3 570 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 TMEM253P0C7T8 217 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 INHBEP58166 350 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 BTG3Q14201 252 aaPredicted RBP14□□□□□ -0.17
TRAF3-208ENST00000560371 SGO1Q5FBB7 561 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 C4orf19Q8IY42 314 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 UBXN6Q9BZV1 441 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 SPASTQ9UBP0 616 aa14□□□□□ -0.17
TRAF3-208ENST00000560371 EFEMP1Q12805 493 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 CARNMT1Q8N4J0 409 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 DACH2Q96NX9 599 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 PCMTD2Q9NV79 361 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 TRAF3IP3Q9Y228 551 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 GTPBP10A4D1E9 387 aaKnown RBP13.99□□□□□ -0.17
TRAF3-208ENST00000560371 CASP4P49662 377 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 GYS2P54840 703 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 ERVK-9P63128 1117 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 ERVK-24P63145 666 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 CLEC16AQ2KHT3 1053 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 Q4G0T1 1027 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
TRAF3-208ENST00000560371 SMAPO00193 183 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 KCNJ1P48048 391 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 PPATQ06203 517 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 STX3Q13277 289 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 C11orf96Q7Z7L8 435 aa13.99□□□□□ -0.17
TRAF3-208ENST00000560371 ST13P4Q8IZP2 240 aaPredicted RBP13.99□□□□□ -0.17
TRAF3-208ENST00000560371 RFWD2Q8NHY2 731 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms