RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TSHZ1Q6ZSZ6 1077 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 NIPA2Q8N8Q9 360 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SLC35B2Q8TB61 432 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 NKD2Q969F2 451 aaPredicted RBP10.57□□□□□ -0.72
LRRC28-216ENST00000559819 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 FAM167AQ96KS9 214 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 SPATA33Q96N06 139 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 ZNF518BQ9C0D4 1074 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 RAB6CQ9H0N0 254 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 TRABDQ9H4I3 376 aa10.57□□□□□ -0.72
LRRC28-216ENST00000559819 FAM47DPA6NHR8 397 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 GPR25O00155 361 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ACKR2O00590 384 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 LGR5O75473 907 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ITGAVP06756 1048 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 KRT15P19012 456 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 PTPN7P35236 360 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CTCFP49711 727 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 GPX6P59796 221 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 COPS2P61201 443 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 IRX3P78415 501 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 MXD4Q14582 209 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 Q3C1V9 767 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CELF3Q5SZQ8 465 aaKnown RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SWT1Q5T5J6 900 aaKnown RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 EFCAB12Q6NXP0 572 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 FITM2Q8N6M3 262 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 C1orf127Q8N9H9 656 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 NLGN2Q8NFZ4 835 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CCHCR1Q8TD31 782 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 HSPH1Q92598 858 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CLMNQ96JQ2 1002 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 WDR83Q9BRX9 315 aaKnown RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 FOXP3Q9BZS1 431 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ELOVL4Q9GZR5 314 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 PCDH9Q9HC56 1237 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 PDGFCQ9NRA1 345 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 PRKAG3Q9UGI9 489 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 TRIM33Q9UPN9 1127 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CLUHO75153 1309 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SIGLEC16A6NMB1 481 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 LACTBL1A8MY62 500 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CHUKO15111 745 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ALOX15BO15296 676 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ITGB3P05106 788 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 TGFB3P10600 412 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 KDELR1P24390 212 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SSTR1P30872 391 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 YWHAEP62258 255 aaKnown RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 TAP1Q03518 808 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 MBTD1Q05BQ5 628 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 DNAJC3Q13217 504 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SURF1Q15526 300 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 GALNTL6Q49A17 601 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 GJC2Q5T442 439 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SYCP2LQ5T4T6 812 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 WDR78Q5VTH9 848 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 JADE1Q6IE81 842 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 PNMA8AQ86V59 439 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 RFX6Q8HWS3 928 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 UNC45BQ8IWX7 931 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ANKLE1Q8NAG6 615 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SLC4A11Q8NBS3 891 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CPT1BQ92523 772 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 CPB2Q96IY4 423 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-216ENST00000559819 FZD8Q9H461 694 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 SYNCQ9H7C4 482 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 ARL2BPQ9Y2Y0 163 aa10.56□□□□□ -0.72
LRRC28-216ENST00000559819 MGRN1O60291 552 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 B4GALT4O60513 344 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 MICAL2O94851 1124 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 ASMTLO95671 621 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 RPA3P35244 121 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-216ENST00000559819 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
LRRC28-216ENST00000559819 TFDP1Q14186 410 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 E2F5Q15329 346 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 ZNF667Q5HYK9 610 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 SH3PXD2AQ5TCZ1 1133 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 NPNTQ6UXI9 565 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 PPP1R21Q6ZMI0 780 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 CENPUQ71F23 418 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 ECHDC2Q86YB7 292 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 UBA3Q8TBC4 463 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 TTC25Q96NG3 672 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 MAF1Q9H063 256 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 C2orf40Q9H1Z8 148 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 RPF1Q9H9Y2 349 aaKnown RBP10.55□□□□□ -0.72
LRRC28-216ENST00000559819 SLCO1B3Q9NPD5 702 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
LRRC28-216ENST00000559819 PPP2R3BQ9Y5P8 575 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 ACTL7BQ9Y614 415 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 LRRC37A2A6NM11 1700 aa10.55□□□□□ -0.72
LRRC28-216ENST00000559819 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms