RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 CROCCP2Q86T23 111 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 XYLT1Q86Y38 959 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 EMC1Q8N766 993 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 ATXN2LQ8WWM7 1075 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 XPO6Q96QU8 1125 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 ROPN1BQ9BZX4 212 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 ASB7Q9H672 318 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 ROPN1Q9HAT0 212 aaPredicted RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 SLC5A4Q9NY91 659 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 NINJ2Q9NZG7 142 aa11.65□□□□□ -0.54
SPG11-217ENST00000559511 PDCD11Q14690 1871 aaKnown RBP11.65□□□□□ -0.54
SPG11-217ENST00000559511 LRCH4O75427 683 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 MICAL2O94851 1124 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 IL1R2P27930 398 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 COPS2P61201 443 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 PDE4CQ08493 712 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 TMEM132DQ14C87 1099 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 HIBCHQ6NVY1 386 aaPredicted RBP11.65□□□□□ -0.55
SPG11-217ENST00000559511 ALLCQ8N6M5 410 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 CENPTQ96BT3 561 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 TMEM176AQ96HP8 235 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 HPDLQ96IR7 371 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 TSPYL1Q9H0U9 437 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 VRTNQ9H8Y1 702 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 ZWILCHQ9H900 591 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 METTL5Q9NRN9 209 aaKnown RBP11.65□□□□□ -0.55
SPG11-217ENST00000559511 DDX56Q9NY93 547 aaKnown RBP11.65□□□□□ -0.55
SPG11-217ENST00000559511 CTNNAL1Q9UBT7 734 aa11.65□□□□□ -0.55
SPG11-217ENST00000559511 DYNC1LI2O43237 492 aaPredicted RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 ATICP31939 592 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 GSCP56915 257 aaPredicted RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 OASLQ15646 514 aaKnown RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 KCNT1Q5JUK3 1230 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 IPO4Q8TEX9 1081 aaKnown RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 FAXDC2Q96IV6 333 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 CXCL16Q9H2A7 254 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPG11-217ENST00000559511 AGAP1Q9UPQ3 857 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 ZNF148Q9UQR1 794 aa11.64□□□□□ -0.55
SPG11-217ENST00000559511 GNEQ9Y223 722 aaKnown RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 ATXN2Q99700 1313 aaKnown RBP11.64□□□□□ -0.55
SPG11-217ENST00000559511 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 A6NJR5 290 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 FOXO6A8MYZ6 492 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 M0QYV0 167 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 MAGEA9P43362 315 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 ARSEP51690 589 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 CDR1P51861 262 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 LMNB2Q03252 620 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 CCL14Q16627 93 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 C17orf99Q6UX52 265 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 SAPCD2Q86UD0 394 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 FNIP1Q8TF40 1166 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 USP6NLQ92738 828 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 LENG1Q96BZ8 264 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 C9orf72Q96LT7 481 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 SERPINB12Q96P63 405 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 RASSF4Q9H2L5 321 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 SYNCQ9H7C4 482 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 SETD4Q9NVD3 440 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 SAE1Q9UBE0 346 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 DDX20Q9UHI6 824 aaKnown RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 C5orf60A6NFR6 353 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 DNALI1O14645 258 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 CD48P09326 243 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 ZNF865P0CJ78 1059 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 CREB1P16220 341 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 CYP3A5P20815 502 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 DRD4P21917 467 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 GPD2P43304 727 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 RGMBQ6NW40 437 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 DPH6Q7L8W6 267 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 IFNL1Q8IU54 200 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 RELL1Q8IUW5 271 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 ZCCHC9Q8N567 271 aaKnown RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 UBA3Q8TBC4 463 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 HEXIM2Q96MH2 286 aaKnown RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 ZNF317Q96PQ6 595 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 TMEM121Q9BTD3 319 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 STMN4Q9H169 189 aaPredicted RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 CYP3A43Q9HB55 503 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 DRG1Q9Y295 367 aaKnown RBP11.63□□□□□ -0.55
SPG11-217ENST00000559511 C2CD2Q9Y426 696 aa11.63□□□□□ -0.55
SPG11-217ENST00000559511 ITGAVP06756 1048 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 GABRB2P47870 512 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 NDST1P52848 882 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 DYNLT1P63172 113 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 INCA1Q0VD86 236 aa11.62□□□□□ -0.55
SPG11-217ENST00000559511 GPS1Q13098 491 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms