RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CRTAC1Q9NQ79 661 aa13.46□□□□□ -0.25
LRRC28-214ENST00000559433 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 MAGED2Q9UNF1 606 aaPredicted RBP13.46□□□□□ -0.25
LRRC28-214ENST00000559433 MAPK13O15264 365 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 NCAM2O15394 837 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 AKAP3O75969 853 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 VNN1O95497 513 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 C4BPAP04003 597 aaKnown RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 CSH1P0DML2 217 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 CSH2P0DML3 217 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 KRT13P13646 458 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 PSMC3P17980 439 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 PIK3CAP42336 1068 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 MRE11P49959 708 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 VAMP7P51809 220 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 ADAM9Q13443 819 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 MLF2Q15773 248 aaPredicted RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 DDR2Q16832 855 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 ZCWPW2Q504Y3 356 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 VITQ6UXI7 678 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 SCARA5Q6ZMJ2 495 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 INTS8Q75QN2 995 aaKnown RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 SCN4BQ8IWT1 228 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 FAM186BQ8IYM0 893 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 IRF7Q92985 503 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 TIGD1Q96MW7 591 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 NELL2Q99435 816 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 SMYD3Q9H7B4 428 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 IL21Q9HBE4 155 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 MAGEC2Q9UBF1 373 aaPredicted RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 MRPS17Q9Y2R5 130 aaKnown RBP13.45□□□□□ -0.26
LRRC28-214ENST00000559433 ANAPC1Q9H1A4 1944 aa13.45□□□□□ -0.26
LRRC28-214ENST00000559433 NCANO14594 1321 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 PIEZO1Q92508 2521 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 MYH10P35580 1976 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 FAM170BA6NMN3 283 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 SLC38A8A6NNN8 435 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 HEPACAM2A8MVW5 462 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 IKBKBO14920 756 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ZNF263O14978 683 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 DCNP07585 359 aaKnown RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 HMGA1P17096 107 aaKnown RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 GDI1P31150 447 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 PSMC2P35998 433 aaKnown RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 MAGEA11P43364 429 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 RAP1GAPP47736 663 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 NLRP12P59046 1061 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 STARD6P59095 220 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ZACNQ401N2 412 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 C1orf220Q5T0J3 134 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ZNF658Q5TYW1 1059 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ZNF852Q6ZMS4 543 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 GPIHBP1Q8IV16 184 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 CCDC105Q8IYK2 499 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 MYCBPAPQ8TBZ2 947 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 DEPDC1BQ8WUY9 529 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 DNASE1L2Q92874 299 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 ELMO3Q96BJ8 720 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 BCO2Q9BYV7 579 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 FOXQ1Q9C009 403 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 DPEP3Q9H4B8 488 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 TASP1Q9H6P5 420 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 FAM86C1Q9NVL1 165 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 NME7Q9Y5B8 376 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 PCDHA5Q9Y5H7 936 aa13.44□□□□□ -0.26
LRRC28-214ENST00000559433 KIF26AQ9ULI4 1882 aaPredicted RBP13.44□□□□□ -0.26
LRRC28-214ENST00000559433 HELZP42694 1942 aaKnown RBP13.43□□□□□ -0.26
LRRC28-214ENST00000559433 A8MXQ7 604 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 MAN2B1O00754 1011 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 NOL4O94818 638 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 P4HA1P13674 534 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 BDNFP23560 247 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 ANXA13P27216 316 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 GRIK1P39086 918 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 PRCPP42785 496 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 SGSM1Q2NKQ1 1148 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 TPRG1Q6ZUI0 275 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 SV2AQ7L0J3 742 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 TMEM150AQ86TG1 271 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 MFSD6LQ8IWD5 586 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 CSGALNACT1Q8TDX6 532 aa13.43□□□□□ -0.26
LRRC28-214ENST00000559433 RSPRY1Q96DX4 576 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms