RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 NME7Q9Y5B8 376 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 PCDHA11Q9Y5I1 949 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 TIMM13Q9Y5L4 95 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 NCANO14594 1321 aa16.83■□□□□ 0.29
CDC42BPB-204ENST00000559043 TADA2AO75478 443 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 TNNT3P45378 269 aaPredicted RBP16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 RAP1GAPP47736 663 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 MYO1EQ12965 1108 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 WDR44Q5JSH3 913 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 SCARA5Q6ZMJ2 495 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 GLYCTKQ8IVS8 523 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 GSPT2Q8IYD1 628 aaKnown RBP16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 PPM1KQ8N3J5 372 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 IGSF21Q96ID5 467 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 B3GALT6Q96L58 329 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 NT5C1BQ96P26 610 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 COLEC11Q9BWP8 271 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 CDH23Q9H251 3354 aa16.83■□□□□ 0.28
CDC42BPB-204ENST00000559043 FOXN3O00409 490 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 HCRTO43612 131 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 LAG3P18627 525 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 PNPLA4P41247 253 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 SLC7A5Q01650 507 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 TAP1Q03518 808 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 SV2CQ496J9 727 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 SYCE1Q8N0S2 351 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 ACTRT1Q8TDG2 376 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 EXOC4Q96A65 974 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 BCO2Q9BYV7 579 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 PSD3Q9NYI0 1048 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 ADAM21Q9UKJ8 722 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 M0QZQ0 153 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 CYB561D2O14569 222 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 BMPR1AP36894 532 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 CUL2Q13617 745 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 HSP90B2PQ58FF3 399 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 WSCD1Q658N2 575 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 SUSD3Q96L08 255 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 GDF3Q9NR23 364 aa16.82■□□□□ 0.28
CDC42BPB-204ENST00000559043 KCNK3O14649 394 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 SYF2O95926 243 aaKnown RBP16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 ACO1P21399 889 aaKnown RBP16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 ARHGAP44Q17R89 818 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 RNF168Q8IYW5 571 aaPredicted RBP16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 UBR7Q8N806 425 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 KLHL23Q8NBE8 558 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 RFFLQ8WZ73 363 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 IMPG2Q9BZV3 1241 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 NKX2-4Q9H2Z4 354 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 MTUS1Q9ULD2 1270 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 TRIOBPQ9H2D6 2365 aa16.81■□□□□ 0.28
CDC42BPB-204ENST00000559043 CLSTN1O94985 981 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 TKTP29401 623 aaKnown RBP16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 DNA2P51530 1060 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 EMBQ6PCB8 327 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 NT5DC3Q86UY8 548 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 OSTM1Q86WC4 334 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 GOLPH3Q9H4A6 298 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 VPS18Q9P253 973 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 VWA8A3KMH1 1905 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 FGF18O76093 207 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 TNFAIP3P21580 790 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 LMO2P25791 158 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 TNNC1P63316 161 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 MRPS25P82663 173 aaKnown RBP16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 GCNT1Q02742 428 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 PEX26Q7Z412 305 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 IFT20Q8IY31 132 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 WHAMMQ8TF30 809 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 HES6Q96HZ4 224 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 AGPAT1Q99943 283 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 HMGXB4Q9UGU5 601 aa16.8■□□□□ 0.28
CDC42BPB-204ENST00000559043 CALCAP01258 141 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 GLI1P08151 1106 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 CD58P19256 250 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 DNAJB1P25685 340 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 GYS2P54840 703 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 RASGEF1CQ8N431 466 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 CTNNBL1Q8WYA6 563 aaPredicted RBP16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 CALR3Q96L12 384 aaKnown RBP16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 GDAP1L1Q96MZ0 367 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 TWNKQ96RR1 684 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 HINFPQ9BQA5 517 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 RTP3Q9BQQ7 232 aa16.79■□□□□ 0.28
CDC42BPB-204ENST00000559043 ALG13Q9NP73 1137 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms