RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 SHISA7A6NL88 538 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 SOBPA7XYQ1 873 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 ARNTLO00327 626 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 PI15O43692 258 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 KINO60870 393 aaKnown RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 ATP2C2O75185 946 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 AKAP3O75969 853 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 NOL4O94818 638 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 F11P03951 625 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 PSMC3P17980 439 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 LMO2P25791 158 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 HOXD11P31277 338 aaPredicted RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 TNNC1P63316 161 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 FCHO2Q0JRZ9 810 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 TRPC3Q13507 836 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 NCOA4Q13772 614 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 MLF2Q15773 248 aaPredicted RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 STXBP5Q5T5C0 1151 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 VSTM1Q6UX27 236 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 C4orf50Q6ZRC1 276 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 INTS8Q75QN2 995 aaKnown RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 CCDC105Q8IYK2 499 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 PJA1Q8NG27 643 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 SHDQ96IW2 340 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 MMS19Q96T76 1030 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 MRPL45Q9BRJ2 306 aaKnown RBP12.01□□□□□ -0.49
BMP4-204ENST00000558961 IRF2BPLQ9H1B7 796 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 OBP2AQ9NY56 170 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 FRMD4BQ9Y2L6 1034 aa12.01□□□□□ -0.49
BMP4-204ENST00000558961 FANCMQ8IYD8 2048 aa12□□□□□ -0.49
BMP4-204ENST00000558961 TADA3O75528 432 aa12□□□□□ -0.49
BMP4-204ENST00000558961 CYP2F1P24903 491 aa12□□□□□ -0.49
BMP4-204ENST00000558961 RPL13P26373 211 aaKnown RBP12□□□□□ -0.49
BMP4-204ENST00000558961 GPR15P49685 360 aa12□□□□□ -0.49
BMP4-204ENST00000558961 VAMP7P51809 220 aa12□□□□□ -0.49
BMP4-204ENST00000558961 CDR1P51861 262 aa12□□□□□ -0.49
BMP4-204ENST00000558961 NLRP12P59046 1061 aa12□□□□□ -0.49
BMP4-204ENST00000558961 PSMC1P62191 440 aaKnown RBP12□□□□□ -0.49
BMP4-204ENST00000558961 BIRC3Q13489 604 aa12□□□□□ -0.49
BMP4-204ENST00000558961 CAMK4Q16566 473 aa12□□□□□ -0.49
BMP4-204ENST00000558961 ZNF699Q32M78 642 aa12□□□□□ -0.49
BMP4-204ENST00000558961 SLC44A4Q53GD3 710 aa12□□□□□ -0.49
BMP4-204ENST00000558961 ARHGAP15Q53QZ3 475 aa12□□□□□ -0.49
BMP4-204ENST00000558961 CEP135Q66GS9 1140 aa12□□□□□ -0.49
BMP4-204ENST00000558961 SV2AQ7L0J3 742 aa12□□□□□ -0.49
BMP4-204ENST00000558961 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
BMP4-204ENST00000558961 ARID3BQ8IVW6 561 aaPredicted RBP12□□□□□ -0.49
BMP4-204ENST00000558961 MFSD6LQ8IWD5 586 aa12□□□□□ -0.49
BMP4-204ENST00000558961 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
BMP4-204ENST00000558961 MYCBPAPQ8TBZ2 947 aa12□□□□□ -0.49
BMP4-204ENST00000558961 FAM200AQ8TCP9 573 aa12□□□□□ -0.49
BMP4-204ENST00000558961 GIPC2Q8TF65 315 aa12□□□□□ -0.49
BMP4-204ENST00000558961 TAF4BQ92750 862 aa12□□□□□ -0.49
BMP4-204ENST00000558961 MYLPFQ96A32 169 aa12□□□□□ -0.49
BMP4-204ENST00000558961 RSPRY1Q96DX4 576 aa12□□□□□ -0.49
BMP4-204ENST00000558961 PCED1BQ96HM7 432 aa12□□□□□ -0.49
BMP4-204ENST00000558961 SPATA17Q96L03 361 aa12□□□□□ -0.49
BMP4-204ENST00000558961 GCNAQ96QF7 691 aa12□□□□□ -0.49
BMP4-204ENST00000558961 TRMT61BQ9BVS5 477 aaKnown RBP12□□□□□ -0.49
BMP4-204ENST00000558961 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
BMP4-204ENST00000558961 OSBPL6Q9BZF3 934 aa12□□□□□ -0.49
BMP4-204ENST00000558961 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
BMP4-204ENST00000558961 SLITRK6Q9H5Y7 841 aa12□□□□□ -0.49
BMP4-204ENST00000558961 TASP1Q9H6P5 420 aa12□□□□□ -0.49
BMP4-204ENST00000558961 UXTQ9UBK9 157 aaPredicted RBP12□□□□□ -0.49
BMP4-204ENST00000558961 MAPK8IP1Q9UQF2 711 aa12□□□□□ -0.49
BMP4-204ENST00000558961 KANSL1LA0AUZ9 987 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 HEPACAM2A8MVW5 462 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 PHACTR2O75167 634 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 PRAMEF12O95522 483 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 ASS1P00966 412 aaKnown RBP11.99□□□□□ -0.49
BMP4-204ENST00000558961 DDX6P26196 483 aaKnown RBP eCLIP11.99□□□□□ -0.491e-7■□□□□ 8.8
BMP4-204ENST00000558961 PSMC2P35998 433 aaKnown RBP11.99□□□□□ -0.49
BMP4-204ENST00000558961 VIPR2P41587 438 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 PRCPP42785 496 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 MLLT6P55198 1093 aaPredicted RBP11.99□□□□□ -0.49
BMP4-204ENST00000558961 CYP4F8P98187 520 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 GRM2Q14416 872 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 DDR2Q16832 855 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 ZNF667Q5HYK9 610 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 GPR158Q5T848 1215 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 FAM186BQ8IYM0 893 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
BMP4-204ENST00000558961 DTWD2Q8NBA8 298 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 IRF7Q92985 503 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 SNX25Q9H3E2 840 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 SMYD3Q9H7B4 428 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 MAGEC2Q9UBF1 373 aaPredicted RBP11.99□□□□□ -0.49
BMP4-204ENST00000558961 SIT1Q9Y3P8 196 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
BMP4-204ENST00000558961 CACNA1HO95180 2353 aa11.98□□□□□ -0.49
BMP4-204ENST00000558961 GOLGA6L3A6NEY3 463 aa11.98□□□□□ -0.49
BMP4-204ENST00000558961 SLC38A8A6NNN8 435 aa11.98□□□□□ -0.49
BMP4-204ENST00000558961 CHADO15335 359 aa11.98□□□□□ -0.49
BMP4-204ENST00000558961 SMC2O95347 1197 aa11.98□□□□□ -0.49
BMP4-204ENST00000558961 PDGFRBP09619 1106 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms