RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 TTC30AQ86WT1 665 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 GPR65Q8IYL9 337 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 DCP1BQ8IZD4 617 aaKnown RBP19.16■□□□□ 0.66
CLPX-203ENST00000558958 WDTC1Q8N5D0 677 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ANKRD52Q8NB46 1076 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 SAMD11Q96NU1 681 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 TGS1Q96RS0 853 aaKnown RBP19.16■□□□□ 0.66
CLPX-203ENST00000558958 B3GNT5Q9BYG0 378 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 PRO3102Q9H379 93 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.16■□□□□ 0.66
CLPX-203ENST00000558958 LZTS1Q9Y250 596 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ZKSCAN5Q9Y2L8 839 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 CEP83Q9Y592 693 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 GBF1Q92538 1859 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 CLDN5O00501 218 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 URODP06132 367 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 OR4Q2P0C623 313 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ADORA2BP29275 332 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ERVK-21P61565 698 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 CENPCQ03188 943 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 C10orf76Q5T2E6 689 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 NAA35Q5VZE5 725 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ZNF518BQ9C0D4 1074 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ZBP1Q9H171 429 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 ISCUQ9H1K1 167 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 HESX1Q9UBX0 185 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 MSRAQ9UJ68 235 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 PCDHA13Q9Y5I0 950 aa19.16■□□□□ 0.66
CLPX-203ENST00000558958 NLRC5Q86WI3 1866 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 TMCO5BA8MYB1 307 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 C2CD2LO14523 706 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 RTN2O75298 545 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 CCDC175P0C221 793 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 CTSAP10619 480 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 GPD2P43304 727 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 MAGEA1P43355 309 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 SLC39A12Q504Y0 691 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 SLC8B1Q6J4K2 584 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 ACAD10Q6JQN1 1059 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 C1orf131Q8NDD1 294 aaKnown RBP19.15■□□□□ 0.66
CLPX-203ENST00000558958 FBXO22Q8NEZ5 403 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 UBA3Q8TBC4 463 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 KIAA1524Q8TCG1 905 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 SPPL3Q8TCT6 385 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 CPA5Q8WXQ8 436 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 MED10Q9BTT4 135 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 C11orf84Q9BUA3 381 aaPredicted RBP19.15■□□□□ 0.66
CLPX-203ENST00000558958 ALG13Q9NP73 1137 aaKnown RBP19.15■□□□□ 0.66
CLPX-203ENST00000558958 MRPL17Q9NRX2 175 aaKnown RBP19.15■□□□□ 0.66
CLPX-203ENST00000558958 MTUS1Q9ULD2 1270 aa19.15■□□□□ 0.66
CLPX-203ENST00000558958 CHD7Q9P2D1 2997 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 LILRB3O75022 631 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 FTLP02792 175 aaPredicted RBP19.14■□□□□ 0.65
CLPX-203ENST00000558958 CDR1P51861 262 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 BCAT1P54687 386 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 UBE3AQ05086 875 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 NFE2Q16621 373 aaPredicted RBP19.14■□□□□ 0.65
CLPX-203ENST00000558958 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 C4orf50Q6ZRC1 276 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 FAM35AQ86V20 835 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 DNAAF5Q86Y56 855 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 SECISBP2LQ93073 1101 aaKnown RBP19.14■□□□□ 0.65
CLPX-203ENST00000558958 CLSTN3Q9BQT9 956 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 DUSP16Q9BY84 665 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 NKX2-4Q9H2Z4 354 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 PPP2R2CQ9Y2T4 447 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 CDY1Q9Y6F8 540 aa19.14■□□□□ 0.65
CLPX-203ENST00000558958 ADAM12O43184 909 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 RPL17P18621 184 aaKnown RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 NSFP46459 744 aaKnown RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 MLLT1Q03111 559 aaPredicted RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 BST2Q10589 180 aaKnown RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 GPR17Q13304 367 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 PTPN14Q15678 1187 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 PPP1R2P3Q6NXS1 205 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 PHF13Q86YI8 300 aaPredicted RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 SLC35F5Q8WV83 523 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 AUTS2Q8WXX7 1259 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 LUC7LQ9NQ29 371 aaKnown RBP19.13■□□□□ 0.65
CLPX-203ENST00000558958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.13■□□□□ 0.65
CLPX-203ENST00000558958 KRT82Q9NSB4 513 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 SSX2IPQ9Y2D8 614 aa19.13■□□□□ 0.65
CLPX-203ENST00000558958 ATP8B3O60423 1300 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 PLXNA4Q9HCM2 1894 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 FAM170AA1A519 330 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 H2AFZP0C0S5 128 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 SETSIPP0DME0 302 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 CPB1P15086 417 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 DNAJB1P25685 340 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 DNAJB2P25686 324 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 OR1D2P34982 312 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 VAV2P52735 878 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 ARPP19P56211 112 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 PDE4CQ08493 712 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 SMARCB1Q12824 385 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms