RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 DNAJB7Q7Z6W7 309 aaPredicted RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 TTC8Q8TAM2 541 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 SYT15Q9BQS2 421 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 OXCT2Q9BYC2 517 aaPredicted RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 SMG9Q9H0W8 520 aaKnown RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 SMYD3Q9H7B4 428 aa12.86□□□□□ -0.35
TPM1-216ENST00000558910 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
TPM1-216ENST00000558910 DOCK8Q8NF50 2099 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 ANHXE9PGG2 379 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 PI15O43692 258 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 MOSPD3O75425 235 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 KIF20AO95235 890 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 SMC2O95347 1197 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 CD72P21854 359 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 PAX3P23760 479 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 GCLMP48507 274 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 SNRPFP62306 86 aaKnown RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 ADAM9Q13443 819 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 NCOA4Q13772 614 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 ZNF699Q32M78 642 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 MDH1BQ5I0G3 518 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 INTS6LQ5JSJ4 861 aaKnown RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 GPR158Q5T848 1215 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 SPOPLQ6IQ16 392 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 KLHL10Q6JEL2 608 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 MTSS1LQ765P7 747 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 FAM186BQ8IYM0 893 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 TOP6BLQ8N6T0 577 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 ENGASEQ8NFI3 743 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 ZSCAN18Q8TBC5 510 aaPredicted RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 PARD3BQ8TEW8 1205 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 KBTBD7Q8WVZ9 684 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 FAM122AQ96E09 287 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 SPSB2Q99619 263 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 REPIN1Q9BWE0 567 aaKnown RBP12.85□□□□□ -0.35
TPM1-216ENST00000558910 DPEP3Q9H4B8 488 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 TSC2P49815 1807 aa12.85□□□□□ -0.35
TPM1-216ENST00000558910 NOTCH4Q99466 2003 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 KRBA1A5PL33 1030 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 A8MXQ7 604 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 AKAP3O75969 853 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 VNN1O95497 513 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 SRFP11831 508 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 KRT13P13646 458 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 BDNFP23560 247 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 AVPR2P30518 371 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 CLCN1P35523 988 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 GNL1P36915 607 aaPredicted RBP12.84□□□□□ -0.35
TPM1-216ENST00000558910 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 PRCPP42785 496 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 LHX1P48742 406 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
TPM1-216ENST00000558910 KCNB1Q14721 858 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 CAMK4Q16566 473 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 DPH6Q7L8W6 267 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 ITIH5Q86UX2 942 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 TMC8Q8IU68 726 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 TMEM86AQ8N2M4 240 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 SPPL2BQ8TCT7 592 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 MYLPFQ96A32 169 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 GCNAQ96QF7 691 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 ACBD6Q9BR61 282 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 FOXQ1Q9C009 403 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 SLC6A16Q9GZN6 736 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 TRPC7Q9HCX4 862 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 FAM86C1Q9NVL1 165 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 DMAC2Q9NW81 257 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
TPM1-216ENST00000558910 CLDN5O00501 218 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 LRRN2O75325 713 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 PAPLNO95428 1278 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 DCNP07585 359 aaKnown RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 POU2F2P09086 479 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 PCSK1P29120 753 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 GRIK1P39086 918 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 VAMP7P51809 220 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 NFE2Q16621 373 aaPredicted RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 GAREM2Q75VX8 874 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 GUF1Q8N442 669 aaKnown RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 TMEM105Q8N8V8 129 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 PRSS33Q8NF86 280 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 PSMG2Q969U7 264 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
TPM1-216ENST00000558910 TSG101Q99816 390 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 MED10Q9BTT4 135 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 TBC1D17Q9HA65 648 aa12.83□□□□□ -0.36
TPM1-216ENST00000558910 ZFP14Q9HCL3 533 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms