RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 XYLT2Q9H1B5 865 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 EPC1Q9H2F5 836 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 BLZF1Q9H2G9 400 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CUEDC2Q9H467 287 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 LMAN1LQ9HAT1 526 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 FBRSL1Q9HCM7 1045 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ABCB6Q9NP58 842 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 AGPAT3Q9NRZ7 376 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 RBM12Q9NTZ6 932 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 TMEM30AQ9NV96 361 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ZSCAN32Q9NX65 697 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 DDX43Q9NXZ2 648 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 ABI2Q9NYB9 513 aaPredicted RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 GCNT4Q9P109 453 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 RCOR1Q9UKL0 485 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 GTF3C4Q9UKN8 822 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 NDRG2Q9UN36 371 aaKnown RBP5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PCDHB5Q9Y5E4 795 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 PCDHGA2Q9Y5H1 932 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 GTF3C3Q9Y5Q9 886 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 SPAG17Q6Q759 2223 aa5.96□□□□□ -1.46
SMAD3-209ENST00000558894 CEP192Q8TEP8 1941 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 FAM237AA0A1B0GTK4 181 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 KIAA0391O15091 583 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 POLR2DO15514 142 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 ACTN4O43707 911 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 HUS1O60921 280 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 STAU1O95793 577 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CHRM1P11229 460 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 RFX1P22670 979 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 WARSP23381 471 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 LAMA1P25391 3075 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CDC25CP30307 473 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CACNA2D1P54289 1103 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 MCCD1P59942 119 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 USP46P62068 366 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 RBP5P82980 135 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 DNM1Q05193 864 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 BFSP1Q12934 665 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 STK4Q13043 487 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 PSMD6Q15008 389 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 SNRNP35Q16560 246 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 NFE2Q16621 373 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 GAB4Q2WGN9 574 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 FAM26FQ5R3K3 315 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 FOXD4L5Q5VV16 416 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 NAIF1Q69YI7 327 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 TXNDC8Q6A555 127 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 FSTL4Q6MZW2 842 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 PKN3Q6P5Z2 889 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 UNC13DQ70J99 1090 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 TRAPPC11Q7Z392 1133 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 MON1AQ86VX9 555 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 RALGPS2Q86X27 583 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 METTL23Q86XA0 190 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 WDR49Q8IV35 697 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 C12orf56Q8IXR9 622 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 GRAMD1CQ8IYS0 662 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 DCP1BQ8IZD4 617 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 SYCP3Q8IZU3 236 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CMTM8Q8IZV2 173 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CELF5Q8N6W0 485 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 IQUBQ8NA54 791 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 KIAA0895Q8NCT3 520 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 TTC8Q8TAM2 541 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 BPIFB1Q8TDL5 484 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CACTINQ8WUQ7 758 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 FOXD4L4Q8WXT5 416 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 NUP205Q92621 2012 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 RUBCNQ92622 972 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 RMDN1Q96DB5 314 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 HPDLQ96IR7 371 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF396Q96N95 335 aaPredicted RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 CYP2S1Q96SQ9 504 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 MRPL45Q9BRJ2 306 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 IER2Q9BTL4 223 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 PARD6AQ9NPB6 346 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 DMAC2Q9NW81 257 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 DLL3Q9NYJ7 618 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 HPSEQ9Y251 543 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 MRPS17Q9Y2R5 130 aaKnown RBP5.95□□□□□ -1.46
SMAD3-209ENST00000558894 SNX9Q9Y5X1 595 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 UBE4BO95155 1302 aa5.95□□□□□ -1.46
SMAD3-209ENST00000558894 PVALEFA0A1B0GWK0 134 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 C2orf78A6NCI8 922 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ANTXRLA6NF34 631 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 ZNF233A6NK53 670 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 CLIC2O15247 247 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 NCAM2O15394 837 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 HRO43593 1189 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 KINO60870 393 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 PRPF40AO75400 957 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 TACC1O75410 805 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 VNN1O95497 513 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 OLFM2O95897 454 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 C4BPAP04003 597 aaKnown RBP5.94□□□□□ -1.46
SMAD3-209ENST00000558894 KRT19P08727 400 aa5.94□□□□□ -1.46
SMAD3-209ENST00000558894 MAGEA11P43364 429 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms