RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TSPY1Q01534 308 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 CREB5Q02930 508 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 NR1H3Q13133 447 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 NFE2Q16621 373 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 SYT13Q7L8C5 426 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 OR10T2Q8NGX3 314 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 PYM1Q9BRP8 204 aaKnown RBP17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 EDEM2Q9BV94 578 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 HAPLN2Q9GZV7 340 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 HPS4Q9NQG7 708 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 ABI2Q9NYB9 513 aaPredicted RBP17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 PCDHB5Q9Y5E4 795 aa17.24■□□□□ 0.35
CDC42BPB-203ENST00000558867 FAM208BQ5VWN6 2430 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 KIF26AQ9ULI4 1882 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 A0A0B4J269 797 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 K7ENM7 598 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 SLC26A4O43511 780 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 FAM13AO94988 1023 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 EGFP01133 1207 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 PIGRP01833 764 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 NOVA1P51513 510 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 GALK1P51570 392 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 SLC12A3P55017 1021 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 NLRP12P59046 1061 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 ZNF268Q14587 947 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 USP39Q53GS9 565 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 ARL6IP4Q66PJ3 421 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 USP13Q92995 863 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 DUSP15Q9H1R2 295 aaPredicted RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 EBF1Q9UH73 591 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 CPSF3Q9UKF6 684 aaKnown RBP17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 C2CD2Q9Y426 696 aa17.23■□□□□ 0.35
CDC42BPB-203ENST00000558867 ANO9A1A5B4 782 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 PPEF2O14830 753 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 KHNYNO15037 678 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 GBP1P32455 592 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 IFNAR2P48551 515 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 PSMD2Q13200 908 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 IL17AQ16552 155 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 SV2CQ496J9 727 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 TRIM68Q6AZZ1 485 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 SHC4Q6S5L8 630 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 MON1AQ86VX9 555 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 RPLP0P6Q8NHW5 317 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 CD101Q93033 1021 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 ATP2A3Q93084 1043 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 CALML4Q96GE6 196 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 PLIN2Q99541 437 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 SMOC1Q9H4F8 434 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 PARVGQ9HBI0 331 aa17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 MAGED2Q9UNF1 606 aaPredicted RBP17.22■□□□□ 0.35
CDC42BPB-203ENST00000558867 BCLAF3A2AJT9 711 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 C4orf47A7E2U8 309 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 F11P03951 625 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 PFKFB1P16118 471 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 HOXC13P31276 330 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 PNPLA4P41247 253 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 NDUFA8P51970 172 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 DGKEP52429 567 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 POU5F1Q01860 360 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 DMC1Q14565 340 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 UNQ6494/PRO21346Q6UXR6 183 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 ZNF560Q96MR9 790 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 CCSER1Q9C0I3 900 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 DUS2Q9NX74 493 aaKnown RBP17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 DPP3Q9NY33 737 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 CCL26Q9Y258 94 aa17.21■□□□□ 0.35
CDC42BPB-203ENST00000558867 ZNF638Q14966 1978 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 A0A1B0GVL5 298 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 TMEM8BA6NDV4 472 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 KPNA7A9QM74 516 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 FAM189A1O60320 539 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 TBCAO75347 108 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 NFICP08651 508 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 ARSAP15289 507 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 NMT1P30419 496 aaKnown RBP17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 GJA4P35212 333 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 MTF1Q14872 753 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 WSCD1Q658N2 575 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 TXNDC8Q6A555 127 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 NT5DC4Q86YG4 428 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 TSTD1Q8NFU3 115 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 AK8Q96MA6 479 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 RBSNQ9H1K0 784 aa17.2■□□□□ 0.34
CDC42BPB-203ENST00000558867 ZHX3Q9H4I2 956 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms