RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MED7O43513 233 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 ERBB2P04626 1255 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 CSF2RAP15509 400 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 TCF4P15884 667 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 ECHS1P30084 290 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 RWDD2BP57060 319 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 DSC3Q14574 896 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 CASP8Q14790 479 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 PKDCCQ504Y2 493 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 ERICH1Q86X53 443 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 C12orf29Q8N999 325 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 RNF169Q8NCN4 708 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 CASKIN2Q8WXE0 1202 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 LINC01599Q8WXQ3 324 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SEC14L1Q92503 715 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SEPT8Q92599 483 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 ZFP42Q96MM3 310 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 MCEEQ96PE7 176 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 NT5C1AQ9BXI3 368 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SLITRK6Q9H5Y7 841 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 AMACRQ9UHK6 382 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 LAMA2P24043 3122 aaKnown RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 HCRTO43612 131 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 PARNO95453 639 aaKnown RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 FGFR1P11362 822 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SYN1P17600 705 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 GABRB2P47870 512 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 CARSP49589 748 aaKnown RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 AFF1P51825 1210 aaKnown RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 PDCLQ13371 301 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 SGO2Q562F6 1265 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 DNAJC24Q6P3W2 148 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 LCLAT1Q6UWP7 414 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
SMAD3-207ENST00000558763 XYLT1Q86Y38 959 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
SMAD3-207ENST00000558763 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 CXCL10P02778 98 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 IGFBP6P24592 240 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-207ENST00000558763 LRPAP1P30533 357 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 CYP1B1Q16678 543 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 MFSD5Q6N075 450 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 ANKS1BQ7Z6G8 1248 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-207ENST00000558763 NIPA2Q8N8Q9 360 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 DPF3Q92784 378 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 LPPQ93052 612 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
SMAD3-207ENST00000558763 NAP1L3Q99457 506 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-207ENST00000558763 FTHL17Q9BXU8 183 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 EPB41L5Q9HCM4 733 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 TSPAN16Q9UKR8 245 aa13.68□□□□□ -0.22
SMAD3-207ENST00000558763 TSC2P49815 1807 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 M0QYV0 167 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TTI1O43156 1089 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 PPP1R26Q5T8A7 1209 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TTC27Q6P3X3 843 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 HDXQ7Z353 690 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TTC30AQ86WT1 665 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TMEM199Q8N511 208 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 JOSD2Q8TAC2 188 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 APBB2Q92870 758 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 VWCEQ96DN2 955 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 MCRS1Q96EZ8 462 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 KIAA1257Q9ULG3 409 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 ZMYND8Q9ULU4 1186 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 A0A0U1RQF3 1178 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 F8VP50 259 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 FSCN2O14926 492 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 RARAP10276 462 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 ACRP10323 421 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 RFC2P35250 354 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 CLUL1Q15846 466 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 AGMOQ6ZNB7 445 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 ACOT1Q86TX2 421 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 KATNAL2Q8IYT4 538 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 ARFGAP1Q8N6T3 406 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 BADQ92934 168 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 GDAP1L1Q96MZ0 367 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 LPIN3Q9BQK8 851 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TSPYL2Q9H2G4 693 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 DPEP3Q9H4B8 488 aa13.67□□□□□ -0.22
SMAD3-207ENST00000558763 TDRD15B5MCY1 1934 aaKnown RBP13.67□□□□□ -0.22
SMAD3-207ENST00000558763 LTBP2Q14767 1821 aa13.66□□□□□ -0.22
SMAD3-207ENST00000558763 SIGLEC16A6NMB1 481 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms