RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CDC25CP30307 473 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PPP3CAQ08209 521 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PAK1Q13153 545 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 CT47A1Q5JQC4 288 aaPredicted RBP9.05□□□□□ -0.96
TPM1-213ENST00000558400 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 C1orf220Q5T0J3 134 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 IER5LQ5T953 404 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 TCERG1LQ5VWI1 586 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 KLHL10Q6JEL2 608 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 OSTM1Q86WC4 334 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 NPAS3Q8IXF0 933 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 FBXL13Q8NEE6 735 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 FEZF2Q8TBJ5 459 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 NELFBQ8WX92 580 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PBXIP1Q96AQ6 731 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 MCRS1Q96EZ8 462 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 FAM84AQ96KN4 292 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 GCNAQ96QF7 691 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PKMYT1Q99640 499 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 PI4K2AQ9BTU6 479 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 CRISPLD1Q9H336 500 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 ZFP14Q9HCL3 533 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 RAB20Q9NX57 234 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 DUSP12Q9UNI6 340 aa9.05□□□□□ -0.96
TPM1-213ENST00000558400 ANK1P16157 1881 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TMEM221A6NGB7 291 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 M0R296 226 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TRIM66O15016 1216 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 P4HA2O15460 535 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 ECI2O75521 394 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 SRFP11831 508 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 BMP6P22004 513 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 CYP2F1P24903 491 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 DDX6P26196 483 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM1-213ENST00000558400 WEE1P30291 646 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 GRIK1P39086 918 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 PPP3CCP48454 512 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 MXI1P50539 228 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 PMS1P54277 932 aaKnown RBP9.04□□□□□ -0.96
TPM1-213ENST00000558400 PFKPQ01813 784 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 HTR4Q13639 388 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 SLC5A9Q2M3M2 681 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TTI2Q6NXR4 508 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 HS6ST3Q8IZP7 471 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 CRYBG2Q8N1P7 616 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 B3GALNT2Q8NCR0 500 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TAS1R2Q8TE23 839 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 SMARCD2Q92925 531 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 ELSPBP1Q96BH3 223 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 EEF2KMTQ96G04 330 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 SPATA17Q96L03 361 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 MRPL45Q9BRJ2 306 aaKnown RBP9.04□□□□□ -0.96
TPM1-213ENST00000558400 LRRC3Q9BY71 257 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 ELOVL4Q9GZR5 314 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 NUP62CLQ9H1M0 184 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 DNAJC25Q9H1X3 360 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 ATXN3LQ9H3M9 355 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 CLSTN2Q9H4D0 955 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TRPV4Q9HBA0 871 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 SLC2A4RGQ9NR83 387 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 LMBRD1Q9NUN5 540 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TMLHEQ9NVH6 421 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 FAM86C1Q9NVL1 165 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 DACH1Q9UI36 760 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 RWDD2AQ9UIY3 292 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 COQ4Q9Y3A0 265 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TRIOO75962 3097 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 MYO10Q9HD67 2058 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 ATP8B3O60423 1300 aa9.04□□□□□ -0.96
TPM1-213ENST00000558400 TRIM49BA6NDI0 452 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 ATP2C2O75185 946 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 TRIM49P0CI25 452 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 TRIM49CP0CI26 452 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CCDC192P0DO97 292 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 ATF6P18850 670 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 BDNFP23560 247 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 ANXA13P27216 316 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 GABRR2P28476 465 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CCR2P41597 374 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CDH8P55286 799 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 YWHAEP62258 255 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 NOP14P78316 857 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 CYP27A1Q02318 531 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 DDR2Q16832 855 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 CCDC40Q4G0X9 1142 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 PARM1Q6UWI2 310 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 GAREM2Q75VX8 874 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 TMC8Q8IU68 726 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 SCN4BQ8IWT1 228 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 SUGP1Q8IWZ8 645 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 TTC9BQ8N6N2 239 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 ING5Q8WYH8 240 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 MRPS31Q92665 395 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 TCEAL4Q96EI5 215 aa9.03□□□□□ -0.96
TPM1-213ENST00000558400 TRMT2BQ96GJ1 504 aaKnown RBP9.03□□□□□ -0.96
TPM1-213ENST00000558400 PCED1BQ96HM7 432 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms