RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 TOP6BLQ8N6T0 577 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 SPATA18Q8TC71 538 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 GAB3Q8WWW8 586 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 CBWD1Q9BRT8 395 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 PCIF1Q9H4Z3 704 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
SCFD1-224ENST00000557713 SIX4Q9UIU6 781 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 SNX9Q9Y5X1 595 aa17.13■□□□□ 0.33
SCFD1-224ENST00000557713 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
SCFD1-224ENST00000557713 OBSL1O75147 1896 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 A0A087X0B3 334 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 TULP1O00294 542 aaPredicted RBP17.12■□□□□ 0.33
SCFD1-224ENST00000557713 HCRTO43612 131 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 EGFP01133 1207 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 ADRB1P08588 477 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 IDEP14735 1019 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 SYT1P21579 422 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 LHX1P48742 406 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 PXNP49023 591 aaPredicted RBP17.12■□□□□ 0.33
SCFD1-224ENST00000557713 AMPD2Q01433 879 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CEBPZQ03701 1054 aaKnown RBP17.12■□□□□ 0.33
SCFD1-224ENST00000557713 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CCDC142Q17RM4 750 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 SOWAHAQ2M3V2 549 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CFAP221Q4G0U5 840 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CC2D1AQ6P1N0 951 aaPredicted RBP17.12■□□□□ 0.33
SCFD1-224ENST00000557713 FAM171BQ6P995 826 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CCDC73Q6ZRK6 1079 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 LIMS2Q7Z4I7 341 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 LOXL4Q96JB6 756 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 CYP2S1Q96SQ9 504 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 PANK4Q9NVE7 773 aa17.12■□□□□ 0.33
SCFD1-224ENST00000557713 AXIN1O15169 862 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
SCFD1-224ENST00000557713 KRT19P08727 400 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 DRD1P21728 446 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 GJA4P35212 333 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 RAP1GAPP47736 663 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 FAM160A1Q05DH4 1040 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 SLC39A14Q15043 492 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 ZNF77Q15935 545 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 DPH6Q7L8W6 267 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 ADGRF2Q8IZF7 708 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 GPD1LQ8N335 351 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 CAMKK1Q8N5S9 505 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 FUBP3Q96I24 572 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCFD1-224ENST00000557713 P2RY13Q9BPV8 354 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 MTMR12Q9C0I1 747 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 ARRDC1-AS1Q9H2J1 176 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 ECT2Q9H8V3 914 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
SCFD1-224ENST00000557713 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 SLC8A2Q9UPR5 921 aa17.11■□□□□ 0.33
SCFD1-224ENST00000557713 RNF40O75150 1001 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
SCFD1-224ENST00000557713 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 PCSK1P29120 753 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 STAT6P42226 847 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 MTF1Q14872 753 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 PPM1JQ5JR12 505 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
SCFD1-224ENST00000557713 KBTBD6Q86V97 674 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 SPATA2LQ8IUW3 424 aaPredicted RBP17.1■□□□□ 0.33
SCFD1-224ENST00000557713 OSCP1Q8WVF1 389 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 EZH1Q92800 747 aaPredicted RBP17.1■□□□□ 0.33
SCFD1-224ENST00000557713 INTS13Q9NVM9 706 aa17.1■□□□□ 0.33
SCFD1-224ENST00000557713 DUS2Q9NX74 493 aaKnown RBP17.1■□□□□ 0.33
SCFD1-224ENST00000557713 KIAA0391O15091 583 aaKnown RBP17.09■□□□□ 0.33
SCFD1-224ENST00000557713 ATP2C2O75185 946 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 AKAP3O75969 853 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 EPN2O95208 641 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 TMEM191BP0C7N4 346 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 ZNF806P0C7X5 589 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 LMO2P25791 158 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 MAGEA11P43364 429 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 USP4Q13107 963 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 FBXO43Q4G163 708 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 LMBRD2Q68DH5 695 aaPredicted RBP17.09■□□□□ 0.33
SCFD1-224ENST00000557713 SCN4BQ8IWT1 228 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 CPA6Q8N4T0 437 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 NOC3LQ8WTT2 800 aaKnown RBP17.09■□□□□ 0.33
SCFD1-224ENST00000557713 KBTBD7Q8WVZ9 684 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 HPDLQ96IR7 371 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 ANKRD36BP1Q96IX9 119 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 ZC3H10Q96K80 434 aaKnown RBP17.09■□□□□ 0.33
SCFD1-224ENST00000557713 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 TRPC7Q9HCX4 862 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 PTPRJQ12913 1337 aa17.09■□□□□ 0.33
SCFD1-224ENST00000557713 TRAV19A0A0A6YYK7 116 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 HOXD13P35453 343 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 LIMK1P53667 647 aa17.08■□□□□ 0.32
SCFD1-224ENST00000557713 MYO1EQ12965 1108 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms