RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CEP68Q76N32 757 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 C12orf56Q8IXR9 622 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 EFCAB13Q8IY85 973 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 GTPBP4Q9BZE4 634 aaKnown RBP17.87■□□□□ 0.45
NEK9-211ENST00000557673 DNAJC25Q9H1X3 360 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 THG1LQ9NWX6 298 aaKnown RBP17.87■□□□□ 0.45
NEK9-211ENST00000557673 KIAA1468Q9P260 1216 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 CGNQ9P2M7 1197 aaKnown RBP17.87■□□□□ 0.45
NEK9-211ENST00000557673 ZMYM5Q9UJ78 669 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 SLC27A5Q9Y2P5 690 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 C2CD2Q9Y426 696 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 TICRRQ7Z2Z1 1910 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 SCN1AP35498 2009 aa17.87■□□□□ 0.45
NEK9-211ENST00000557673 MTMR11A4FU01 709 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 GOLGA8IPA6NC78 632 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 GOLGA8JA6NMD2 632 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 TULP1O00294 542 aaPredicted RBP17.86■□□□□ 0.45
NEK9-211ENST00000557673 KIAA0391O15091 583 aaKnown RBP17.86■□□□□ 0.45
NEK9-211ENST00000557673 VNN2O95498 520 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 BMP6P22004 513 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 SOX9P48436 509 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 LILRA4P59901 499 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 MORC3Q14149 939 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 VEPH1Q14D04 833 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 ZCWPW2Q504Y3 356 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 PPM1JQ5JR12 505 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 GAREM2Q75VX8 874 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 TRIML1Q8N9V2 468 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 ATAD1Q8NBU5 361 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 GOLGA5Q8TBA6 731 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 RSPRY1Q96DX4 576 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 GCNAQ96QF7 691 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 RBM12Q9NTZ6 932 aaKnown RBP17.86■□□□□ 0.45
NEK9-211ENST00000557673 HSPBP1Q9NZL4 362 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 DSEQ9UL01 958 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 MAPK8IP1Q9UQF2 711 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 NCANO14594 1321 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 COL4A2P08572 1712 aa17.86■□□□□ 0.45
NEK9-211ENST00000557673 ANO9A1A5B4 782 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 K7ESF4 209 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 BIN1O00499 593 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 PIRO00625 290 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 PDXKO00764 312 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 GABRR2P28476 465 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 CDC25CP30307 473 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 POU5F1Q01860 360 aaKnown RBP17.85■□□□□ 0.45
NEK9-211ENST00000557673 GPR158Q5T848 1215 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 HEATR6Q6AI08 1181 aaKnown RBP17.85■□□□□ 0.45
NEK9-211ENST00000557673 BRSK2Q8IWQ3 736 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 BPIFB1Q8TDL5 484 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 NOC3LQ8WTT2 800 aaKnown RBP17.85■□□□□ 0.45
NEK9-211ENST00000557673 FAM84AQ96KN4 292 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 SENP8Q96LD8 212 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 CRISPLD1Q9H336 500 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 PCIF1Q9H4Z3 704 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 TASP1Q9H6P5 420 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 DPP3Q9NY33 737 aa17.85■□□□□ 0.45
NEK9-211ENST00000557673 EXTL3O43909 919 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 IL18RAPO95256 599 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 PRCPP42785 496 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 DMWDQ09019 674 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 SMARCB1Q12824 385 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 CCINQ13939 588 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 PON2Q15165 354 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 TAF12Q16514 161 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 STXBP5Q5T5C0 1151 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 TXNDC11Q6PKC3 985 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 RBM43Q6ZSC3 357 aaKnown RBP17.84■□□□□ 0.45
NEK9-211ENST00000557673 WDR5BQ86VZ2 330 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 GPD1LQ8N335 351 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 TMEM174Q8WUU8 243 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 RBAKQ9NYW8 714 aaPredicted RBP17.84■□□□□ 0.45
NEK9-211ENST00000557673 GTSE1Q9NYZ3 720 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 TRAF3IP3Q9Y228 551 aa17.84■□□□□ 0.45
NEK9-211ENST00000557673 KMT2BQ9UMN6 2715 aaPredicted RBP17.83■□□□□ 0.45
NEK9-211ENST00000557673 CLIC2O15247 247 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 ATG13O75143 517 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 LDHAP00338 332 aaKnown RBP17.83■□□□□ 0.44
NEK9-211ENST00000557673 NR3C1P04150 777 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 CYP2J2P51589 502 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 TFAMQ00059 246 aaKnown RBP17.83■□□□□ 0.44
NEK9-211ENST00000557673 AMPD2Q01433 879 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 ITPRIPL2Q3MIP1 535 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 IL31Q6EBC2 164 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 ISM2Q6H9L7 571 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 Q6ZS52 159 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 METTL23Q86XA0 190 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 GPIHBP1Q8IV16 184 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 SLC9A9Q8IVB4 645 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 THEM5Q8N1Q8 247 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 FAM160A2Q8N612 972 aaPredicted RBP17.83■□□□□ 0.44
NEK9-211ENST00000557673 TTC8Q8TAM2 541 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 C2orf15Q8WU43 125 aaKnown RBP17.83■□□□□ 0.44
NEK9-211ENST00000557673 LOXL4Q96JB6 756 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 ZFYVE19Q96K21 471 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 SEPT5Q99719 369 aaPredicted RBP17.83■□□□□ 0.44
NEK9-211ENST00000557673 MKNK1Q9BUB5 465 aa17.83■□□□□ 0.44
NEK9-211ENST00000557673 CCDC163A0A0D9SF12 145 aa17.82■□□□□ 0.44
NEK9-211ENST00000557673 CALUO43852 315 aaPredicted RBP17.82■□□□□ 0.44
NEK9-211ENST00000557673 CYP11A1P05108 521 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms