RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TRPC3Q13507 836 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 SLC12A1Q13621 1099 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 DLGAP5Q15398 846 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 SLC5A9Q2M3M2 681 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 NBPF8Q3BBV2 869 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 AMOTQ4VCS5 1084 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 PLA1AQ53H76 456 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 ZMAT1Q5H9K5 638 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 FAXCQ5TGI0 409 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 CACHD1Q5VU97 1274 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 CCDC30Q5VVM6 783 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 FAM160B1Q5W0V3 765 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 FCRL6Q6DN72 434 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF280DQ6N043 979 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 C4orf50Q6ZRC1 276 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 RRAGAQ7L523 313 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 KCTD20Q7Z5Y7 419 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 XYLT1Q86Y38 959 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 SLC44A2Q8IWA5 706 aaPredicted RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 FAM9BQ8IZU0 186 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 PDPRQ8NCN5 879 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 C1orf131Q8NDD1 294 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 CPT1CQ8TCG5 803 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 CSGALNACT1Q8TDX6 532 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 ERP27Q96DN0 273 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 RRP36Q96EU6 259 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 YTHDC1Q96MU7 727 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 COG8Q96MW5 612 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 KLHL32Q96NJ5 620 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 DIRC2Q96SL1 478 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 BARD1Q99728 777 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 VKORC1Q9BQB6 163 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 RTKNQ9BST9 563 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 TTYH3Q9C0H2 523 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 TMEM168Q9H0V1 697 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 EPB41L4BQ9H329 900 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 PABPC3Q9H361 631 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 TAF1DQ9H5J8 278 aaPredicted RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
TRAV28-201ENST00000557548 IL23AQ9NPF7 189 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 IRAK4Q9NWZ3 460 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 CLIC5Q9NZA1 410 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 HESX1Q9UBX0 185 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 ATP11BQ9Y2G3 1177 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 SLC45A1Q9Y2W3 748 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 DTNAQ9Y4J8 743 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 AFG3L2Q9Y4W6 797 aa3.61□□□□□ -1.83
TRAV28-201ENST00000557548 TEX51A0A1B0GUA7 166 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF503-AS2A6NEH8 195 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 B5MCH6 92 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 H0Y3Z8 333 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 RRP9O43818 475 aaKnown RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 PEX10O60683 326 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 GLP2RO95838 553 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 POMCP01189 267 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 CYP1A1P04798 512 aaPredicted RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 ITGB1P05556 798 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 CHRM3P20309 590 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 FDXRP22570 491 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 SLC6A2P23975 617 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 KLRK1P26718 216 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 AKT1P31749 480 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 VIPR2P41587 438 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 AARSP49588 968 aaKnown RBP eCLIP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 BCAT1P54687 386 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 NR1H2P55055 460 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 POLE2P56282 527 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 WNT3P56703 355 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 TLE2Q04725 743 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 SCAPQ12770 1279 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 MAPK7Q13164 816 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 BOP1Q14137 746 aaKnown RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 EFR3AQ14156 821 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 NPY5RQ15761 445 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 BTBD16Q32M84 506 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 AGAP9Q5VTM2 703 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 MRNIPQ6NTE8 343 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 C16orf54Q6UWD8 224 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 PPP1R32Q7Z5V6 425 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 ADGRE4PQ86SQ3 457 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 KRT73Q86Y46 540 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 RNF169Q8NCN4 708 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 NGDNQ8NEJ9 315 aaKnown RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 TBC1D15Q8TC07 691 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 SMCR8Q8TEV9 937 aaPredicted RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 FNIP1Q8TF40 1166 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 UCMAQ8WVF2 138 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 C20orf173Q96LM9 149 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 SLC46A1Q96NT5 459 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 MESP1Q9BRJ9 268 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 CENPOQ9BU64 300 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 DDX23Q9BUQ8 820 aaKnown RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 SIK2Q9H0K1 926 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 TP63Q9H3D4 680 aaPredicted RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 BARX1Q9HBU1 254 aaPredicted RBP3.6□□□□□ -1.83
TRAV28-201ENST00000557548 JADE2Q9NQC1 790 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 TBC1D22BQ9NU19 505 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 ZSCAN32Q9NX65 697 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 POLG2Q9UHN1 485 aa3.6□□□□□ -1.83
TRAV28-201ENST00000557548 ADAM29Q9UKF5 820 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms