RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 TJP3O95049 919 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 AHSGP02765 367 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 FESP07332 822 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 NPSP0C0P6 89 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 ARHGAP25P42331 645 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 NR4A2P43354 598 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 MMP13P45452 471 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 CDKN1CP49918 316 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 HOXA4Q00056 320 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 FHL1Q13642 323 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 DAZAP2Q15038 168 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 KRT73Q86Y46 540 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 MIER2Q8N344 545 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 PRR18Q8N4B5 295 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 CPA6Q8N4T0 437 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 PNLDC1Q8NA58 520 aaKnown RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 RP9Q8TA86 221 aaKnown RBP3.35□□□□□ -1.87
FOXN3-216ENST00000557496 CYP2W1Q8TAV3 490 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 WASF1Q92558 559 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 RITA1Q96K30 269 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 C5orf34Q96MH7 638 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 ASB2Q96Q27 587 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 CAMKK2Q96RR4 588 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 TTYH3Q9C0H2 523 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 SPC25Q9HBM1 224 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 PDGFCQ9NRA1 345 aa3.35□□□□□ -1.87
FOXN3-216ENST00000557496 ERC2O15083 957 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 DTNBO60941 627 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 BCAR3O75815 825 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 FTLP02792 175 aaPredicted RBP3.34□□□□□ -1.87
FOXN3-216ENST00000557496 ATXN1LP0C7T5 689 aaKnown RBP3.34□□□□□ -1.87
FOXN3-216ENST00000557496 TYRP14679 529 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 PDCP20941 246 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 PXNP49023 591 aaPredicted RBP3.34□□□□□ -1.87
FOXN3-216ENST00000557496 MAP2K6P52564 334 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 LILRA4P59901 499 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 PTPN21Q16825 1174 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 LONRF3Q496Y0 759 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 EMC10Q5UCC4 262 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 KIRREL2Q6UWL6 708 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 TRIM72Q6ZMU5 477 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 LRRC71Q8N4P6 559 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 GLG1Q92896 1179 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 HMCESQ96FZ2 354 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 ZC3H10Q96K80 434 aaKnown RBP3.34□□□□□ -1.87
FOXN3-216ENST00000557496 FAM167AQ96KS9 214 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 TMEM79Q9BSE2 394 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 PTDSS2Q9BVG9 487 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 GLOD4Q9HC38 313 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 LMBRD1Q9NUN5 540 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 TNKSO95271 1327 aa3.34□□□□□ -1.87
FOXN3-216ENST00000557496 A1L4Q6 167 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 E5RJQ4 531 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 CDK11BP21127 795 aaKnown RBP3.33□□□□□ -1.88
FOXN3-216ENST00000557496 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
FOXN3-216ENST00000557496 GTF2H3Q13889 308 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 IQCB1Q15051 598 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 Q4G0T1 1027 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 ARHGAP40Q5TG30 622 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 LAYNQ6UX15 382 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 Q6ZWC4 215 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 USP45Q70EL2 814 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 PARS2Q7L3T8 475 aaKnown RBP3.33□□□□□ -1.88
FOXN3-216ENST00000557496 CNGA4Q8IV77 575 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 R3HDM4Q96D70 268 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 DAZAP1Q96EP5 407 aaKnown RBP3.33□□□□□ -1.88
FOXN3-216ENST00000557496 THAP7Q9BT49 309 aaPredicted RBP3.33□□□□□ -1.88
FOXN3-216ENST00000557496 GABRQQ9UN88 632 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 WDR17Q8IZU2 1322 aa3.33□□□□□ -1.88
FOXN3-216ENST00000557496 POC1B-GALNT4F8VUJ3 575 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 PLCD1P51178 756 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 POLGP54098 1239 aaPredicted RBP3.32□□□□□ -1.88
FOXN3-216ENST00000557496 PDE1AP54750 535 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 TPTEP56180 551 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 RAPGEF1Q13905 1077 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 RABEP1Q15276 862 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 TRIP6Q15654 476 aaKnown RBP3.32□□□□□ -1.88
FOXN3-216ENST00000557496 ZNF260Q3ZCT1 412 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 KLHL22Q53GT1 634 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 FCRL6Q6DN72 434 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 RGS7BPQ6MZT1 257 aaPredicted RBP3.32□□□□□ -1.88
FOXN3-216ENST00000557496 GALNT4Q8N4A0 578 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 BRIX1Q8TDN6 353 aaKnown RBP3.32□□□□□ -1.88
FOXN3-216ENST00000557496 SOCS4Q8WXH5 440 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 BRIP1Q9BX63 1249 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 KLHL13Q9P2N7 655 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 NDRG4Q9ULP0 352 aaKnown RBP3.32□□□□□ -1.88
FOXN3-216ENST00000557496 AFG3L2Q9Y4W6 797 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 PCDHA1Q9Y5I3 950 aa3.32□□□□□ -1.88
FOXN3-216ENST00000557496 INSIG1O15503 277 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 USP1O94782 785 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 UNC5CO95185 931 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 CSF1RP07333 972 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 CHRM5P08912 532 aaPredicted RBP3.31□□□□□ -1.88
FOXN3-216ENST00000557496 CYP2A6P11509 494 aaPredicted RBP3.31□□□□□ -1.88
FOXN3-216ENST00000557496 HDCP19113 662 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 CCKBRP32239 447 aa3.31□□□□□ -1.88
FOXN3-216ENST00000557496 VIPR2P41587 438 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms