RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 OTUD6AQ7L8S5 288 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 TMEM150AQ86TG1 271 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 EFCAB13Q8IY85 973 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 ZCCHC9Q8N567 271 aaKnown RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 ACAP3Q96P50 834 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 SEPT5Q99719 369 aaPredicted RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 NRSN2Q9GZP1 204 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 POLR3FQ9H1D9 316 aaPredicted RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 GMIPQ9P107 970 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 PCDHGB2Q9Y5G2 931 aa10.27□□□□□ -0.77
NEDD1-211ENST00000557454 TIMM13Q9Y5L4 95 aaPredicted RBP10.27□□□□□ -0.77
NEDD1-211ENST00000557454 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 LARGE1O95461 756 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 LIG1P18858 919 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 MARCKSP29966 332 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 ACTN2P35609 894 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 UCNP55089 124 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 NFKB2Q00653 900 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 HNRNPUQ00839 825 aaKnown RBP eCLIP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 YWHAHQ04917 246 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 NR1H3Q13133 447 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 SERINC3Q13530 473 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 VEPH1Q14D04 833 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 ZNF77Q15935 545 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 RTN1Q16799 776 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 FAM187BQ17R55 369 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 GAB4Q2WGN9 574 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 TBC1D25Q3MII6 688 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 DCAF4L1Q3SXM0 396 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 HSF5Q4G112 596 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 WDR45BQ5MNZ6 344 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 BROXQ5VW32 411 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 USP49Q70CQ1 688 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 C18orf25Q96B23 403 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 ZNF419Q96HQ0 510 aaPredicted RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 ZMAT2Q96NC0 199 aaKnown RBP10.26□□□□□ -0.77
NEDD1-211ENST00000557454 CD93Q9NPY3 652 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 RGL1Q9NZL6 768 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 ZMYM5Q9UJ78 669 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 VAV3Q9UKW4 847 aa10.26□□□□□ -0.77
NEDD1-211ENST00000557454 KNL1Q8NG31 2342 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 SPTBN1Q01082 2364 aaKnown RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 UTP20O75691 2785 aaKnown RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 TLN1Q9Y490 2541 aaKnown RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 OAZ2O95190 189 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 DDX6P26196 483 aaKnown RBP eCLIP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 GNA11P29992 359 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 KIR2DL1P43626 348 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 NLRP12P59046 1061 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 USP4Q13107 963 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 PPP2R5CQ13362 524 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 CTTNQ14247 550 aaKnown RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 ZNF268Q14587 947 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 TAF12Q16514 161 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 KIAA1614Q5VZ46 1190 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 CDCA2Q69YH5 1023 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 APOA5Q6Q788 366 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 ATG14Q6ZNE5 492 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 GIPC2Q8TF65 315 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 CCDC12Q8WUD4 166 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 YTHDC1Q96MU7 727 aaKnown RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 MIR1-1HGQ9H1L0 117 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 SLKQ9H2G2 1235 aaPredicted RBP10.25□□□□□ -0.77
NEDD1-211ENST00000557454 LINC00597Q9H2U6 94 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 GPRC5CQ9NQ84 441 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 SLC38A7Q9NVC3 462 aa10.25□□□□□ -0.77
NEDD1-211ENST00000557454 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 MEI4A8MW99 385 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 TRIM66O15016 1216 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 NDUFS2O75306 463 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 DGAT1O75907 488 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 NFATC1O95644 943 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 GRK6P43250 576 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 FAM160A1Q05DH4 1040 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 MGAT5BQ3V5L5 792 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 HES3Q5TGS1 186 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 IL27RAQ6UWB1 636 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 SYNE3Q6ZMZ3 975 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 ZBTB8OSQ8IWT0 167 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 TMEM130Q8N3G9 435 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 CEP120Q8N960 986 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 ZNF248Q8NDW4 579 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 FOXJ1Q92949 421 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 ERLEC1Q96DZ1 483 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD1-211ENST00000557454 OCEL1Q9H607 264 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 FTSJ1Q9UET6 329 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 CEP192Q8TEP8 1941 aa10.24□□□□□ -0.77
NEDD1-211ENST00000557454 CYP3A7-CYP3A51PA0A087WV96 503 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 SLC37A4O43826 429 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 ZNF217O75362 1048 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 KAT7O95251 611 aa10.23□□□□□ -0.77
NEDD1-211ENST00000557454 AFPP02771 609 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms