RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 LILRB5O75023 590 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 F11P03951 625 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 CYP2F1P24903 491 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 NRLP54845 237 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
SNX6-210ENST00000557341 EHHADHQ08426 723 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SCARA3Q6AZY7 606 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 HS2ST1Q7LGA3 356 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SPATA2LQ8IUW3 424 aaPredicted RBP15.19■□□□□ 0.02
SNX6-210ENST00000557341 NELFCDQ8IXH7 590 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 MAB21L3Q8N8X9 362 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SCFD1Q8WVM8 642 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 TRMT2BQ96GJ1 504 aaKnown RBP15.19■□□□□ 0.02
SNX6-210ENST00000557341 SLC46A2Q9BY10 475 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
SNX6-210ENST00000557341 EPC1Q9H2F5 836 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 NCDNQ9UBB6 729 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
SNX6-210ENST00000557341 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
SNX6-210ENST00000557341 CEP250Q9BV73 2442 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 SOBPA7XYQ1 873 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 TGFB1I1O43294 461 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 NOL4O94818 638 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 DLATP10515 647 aaKnown RBP15.18■□□□□ 0.02
SNX6-210ENST00000557341 ID4P47928 161 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 CYP2J2P51589 502 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 DDR2Q16832 855 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 CCDC142Q17RM4 750 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 SDHAF4Q5VUM1 108 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 RESP18Q5W5W9 173 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 TXNDC11Q6PKC3 985 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 C4orf50Q6ZRC1 276 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 KIAA2013Q8IYS2 634 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 XXYLT1Q8NBI6 393 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 TTC8Q8TAM2 541 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 KBTBD7Q8WVZ9 684 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 FNBP1Q96RU3 617 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 CGRRF1Q99675 332 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 SYT15Q9BQS2 421 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 BLZF1Q9H2G9 400 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 TDP1Q9NUW8 608 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 CDH9Q9ULB4 789 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
SNX6-210ENST00000557341 PVALEFA0A1B0GWK0 134 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 CLIC2O15247 247 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 HCRTO43612 131 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 TADA3O75528 432 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 TDGF1P13385 188 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 TNNI1P19237 187 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 CASP1P29466 404 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 MAGEA11P43364 429 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 PSMC1P62191 440 aaKnown RBP15.17■□□□□ 0.02
SNX6-210ENST00000557341 TNK2Q07912 1038 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 PKP1Q13835 747 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 PSMD6Q15008 389 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 MAPRE1Q15691 268 aaKnown RBP15.17■□□□□ 0.02
SNX6-210ENST00000557341 BMT2Q1RMZ1 405 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 ITPRIPL2Q3MIP1 535 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 DGKKQ5KSL6 1271 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 TXNDC8Q6A555 127 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 TRAPPC11Q7Z392 1133 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 MON1AQ86VX9 555 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 SCN4BQ8IWT1 228 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 SPEM1Q8N4L4 309 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 RDH13Q8NBN7 331 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 USP13Q92995 863 aaPredicted RBP15.17■□□□□ 0.02
SNX6-210ENST00000557341 SECISBP2LQ93073 1101 aaKnown RBP15.17■□□□□ 0.02
SNX6-210ENST00000557341 MYRFLQ96LU7 910 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 MMS19Q96T76 1030 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 CGNQ9P2M7 1197 aaKnown RBP15.17■□□□□ 0.02
SNX6-210ENST00000557341 CCL26Q9Y258 94 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 GPR179Q6PRD1 2367 aa15.17■□□□□ 0.02
SNX6-210ENST00000557341 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 WARSP23381 471 aaKnown RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 AFMP43652 599 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 CXCL12P48061 93 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 FOXK2Q01167 660 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 SATB1Q01826 763 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 DNM1Q05193 864 aaKnown RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 CUL4BQ13620 913 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 GAS6Q14393 721 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 ZNF268Q14587 947 aaPredicted RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 PON2Q15165 354 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 FAM171BQ6P995 826 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 Q6ZS52 159 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 C12orf56Q8IXR9 622 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 DCLK2Q8N568 766 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 FSIP1Q8NA03 581 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 MYLPFQ96A32 169 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 CCDC127Q96BQ5 260 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 SLC39A2Q9NP94 309 aa15.16■□□□□ 0.02
SNX6-210ENST00000557341 RBM12Q9NTZ6 932 aaKnown RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 MAGEC2Q9UBF1 373 aaPredicted RBP15.16■□□□□ 0.02
SNX6-210ENST00000557341 ATP2C2O75185 946 aa15.15■□□□□ 0.02
SNX6-210ENST00000557341 PAPSS2O95340 614 aaPredicted RBP15.15■□□□□ 0.02
SNX6-210ENST00000557341 CKMP06732 381 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms