RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GCN1Q92616 2671 aaKnown RBP5.38□□□□□ -1.55
SCFD1-223ENST00000557076 SDK1Q7Z5N4 2213 aa5.38□□□□□ -1.55
SCFD1-223ENST00000557076 IGF2RP11717 2491 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 CCDC195A0A1B0GUA6 201 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZC3H12DA2A288 527 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 TMEM8BA6NDV4 472 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZBTB5O15062 677 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 NCAM2O15394 837 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MAFGO15525 162 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZNF205O95201 554 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 C1RP00736 705 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 PARP1P09874 1014 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 LAMP2P13473 410 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 PRKCAP17252 672 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 KLRC1P26715 233 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 KLRC2P26717 231 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MARK3P27448 753 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 POLR2BP30876 1174 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 PBX3P40426 434 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 RPS9P46781 194 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 CLCN4P51793 760 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 CRYBB1P53674 252 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 BCAR1P56945 870 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 IGBP1P78318 339 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 GPC5P78333 572 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 WTAPQ15007 396 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 RRP12Q5JTH9 1297 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MTHFD1LQ6UB35 978 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MFSD6Q6ZSS7 791 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 PLPPR4Q7Z2D5 763 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 IGDCC3Q8IVU1 814 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 REXO1Q8N1G1 1221 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 LRRC43Q8N309 656 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZBTB10Q96DT7 871 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 TMEM169Q96HH4 297 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 CDHR1Q96JP9 859 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MYADMQ96S97 322 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MYL10Q9BUA6 226 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 CDADC1Q9BWV3 514 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 LRRCC1Q9C099 1032 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 TOMM22Q9NS69 142 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZBTB40Q9NUA8 1239 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ACSL6Q9UKU0 697 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MTF2Q9Y483 593 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 ZFP37Q9Y6Q3 630 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-223ENST00000557076 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
SCFD1-223ENST00000557076 MYH7BA7E2Y1 1941 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 KAT6AQ92794 2004 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 A0A0U1RQF3 1178 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 SRRM3A6NNA2 597 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 TAF4O00268 1085 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 PPP1R11O60927 126 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 ATP9AO75110 1047 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 CNPP09543 421 aaKnown RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 KCNA2P16389 499 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 IBSPP21815 317 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 SLC26A2P50443 739 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 SP4Q02446 784 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 HTR4Q13639 388 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 NR1I3Q14994 352 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 IL31Q6EBC2 164 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 UNQ6494/PRO21346Q6UXR6 183 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 ECHDC2Q86YB7 292 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 NUP43Q8NFH3 380 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 HDAC7Q8WUI4 952 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 AUTS2Q8WXX7 1259 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 ESR2Q92731 530 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 IGSF21Q96ID5 467 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 PWWP2AQ96N64 755 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 KLHL5Q96PQ7 755 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 PCYT2Q99447 389 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 MRPL9Q9BYD2 267 aaKnown RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 AZI2Q9H6S1 392 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 PRMT8Q9NR22 394 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-223ENST00000557076 RXFP3Q9NSD7 469 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 PCDHA5Q9Y5H7 936 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 FRMPD4Q14CM0 1322 aa5.36□□□□□ -1.55
SCFD1-223ENST00000557076 KIAA1217Q5T5P2 1943 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 NUDT19A8MXV4 375 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 NT5C1B-RDH14C9J2C7 533 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 KLRF2D3W0D1 207 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 TNFRSF10CO14798 259 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 DHX16O60231 1041 aaKnown RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 SMARCA5O60264 1052 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 HBP1O60381 514 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 BUB1BO60566 1050 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 GPR32O75388 356 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 GALTP07902 379 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 TDGF1P13385 188 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 NME1P15531 152 aaKnown RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 ZSCAN20P17040 1043 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 CNR2P34972 360 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 CA8P35219 290 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 METAP2P50579 478 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 STAT5BP51692 787 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 PFKPQ01813 784 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms