RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PSMC3P17980 439 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 NR2F2P24468 414 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 CDC25CP30307 473 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 ATICP31939 592 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MAGEA11P43364 429 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 AP3M2P53677 418 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 NLRP12P59046 1061 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 FAM160A1Q05DH4 1040 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 NCOA4Q13772 614 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 ZNF699Q32M78 642 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 WDR72Q3MJ13 1102 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 GPR158Q5T848 1215 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 CEP135Q66GS9 1140 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 TPRG1Q6ZUI0 275 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 SPATA2LQ8IUW3 424 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 ARID3BQ8IVW6 561 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MFSD6LQ8IWD5 586 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 ZNF687Q8N1G0 1237 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 RIN3Q8TB24 985 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 TMC2Q8TDI7 906 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 CCDC47Q96A33 483 aaKnown RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 SYAP1Q96A49 352 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 TRMT2BQ96GJ1 504 aaKnown RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 PCED1BQ96HM7 432 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 TRMT61BQ9BVS5 477 aaKnown RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 HEBP1Q9NRV9 189 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 TMEM30AQ9NV96 361 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-224ENST00000556737 VPS13AQ96RL7 3174 aa11.04□□□□□ -0.64
SHMT2-224ENST00000556737 KANSL1LA0AUZ9 987 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SLC38A8A6NNN8 435 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 GADD45BO75293 160 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 FAM163BP0C2L3 166 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 CSH1P0DML2 217 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 CSH2P0DML3 217 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 CD72P21854 359 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TARSP26639 723 aaKnown RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 GDI1P31150 447 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 RAP1GAPP47736 663 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 MCCD1P59942 119 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 RPL10AP62906 217 aaKnown RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TNNC1P63316 161 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 PPP3CAQ08209 521 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 BIRC3Q13489 604 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TRPC3Q13507 836 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SKOR2Q2VWA4 1001 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 ARHGAP15Q53QZ3 475 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 COBLL1Q53SF7 1204 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SCARA5Q6ZMJ2 495 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 C4orf50Q6ZRC1 276 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SV2AQ7L0J3 742 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 MYCBPAPQ8TBZ2 947 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 ERCC4Q92889 916 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 E2F7Q96AV8 911 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SHDQ96IW2 340 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 GCNAQ96QF7 691 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SLC46A2Q9BY10 475 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SMG9Q9H0W8 520 aaKnown RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TASP1Q9H6P5 420 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 LTB4R2Q9NPC1 389 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 TRPV5Q9NQA5 729 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 OBP2AQ9NY56 170 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 SIT1Q9Y3P8 196 aa11.03□□□□□ -0.64
SHMT2-224ENST00000556737 ZNF638Q14966 1978 aaKnown RBP11.03□□□□□ -0.64
SHMT2-224ENST00000556737 STK25O00506 426 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 PHACTR2O75167 634 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 MBD3O95983 291 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 PDGFRBP09619 1106 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 RFX1P22670 979 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 BDNFP23560 247 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 DDX6P26196 483 aaKnown RBP eCLIP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 ASPAP45381 313 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 MRE11P49959 708 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 VAMP7P51809 220 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 UBE2HP62256 183 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 ENPEPQ07075 957 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 FZD5Q13467 585 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 ANGPT1Q15389 498 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 EDRF1Q3B7T1 1238 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 VSTM1Q6UX27 236 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 INTS8Q75QN2 995 aaKnown RBP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 ALYREFQ86V81 257 aaKnown RBP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 SCN4BQ8IWT1 228 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
SHMT2-224ENST00000556737 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 B3GALNT2Q8NCR0 500 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.65
SHMT2-224ENST00000556737 SPATA17Q96L03 361 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms