RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 MORC3Q14149 939 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 GRM2Q14416 872 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 TCERG1LQ5VWI1 586 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 CWF19L1Q69YN2 538 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 FAM171BQ6P995 826 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ITIH5Q86UX2 942 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 SUGP1Q8IWZ8 645 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 SIX5Q8N196 739 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 FBXL6Q8N531 539 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 LEMD2Q8NC56 503 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ZSCAN18Q8TBC5 510 aaPredicted RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 NELFBQ8WX92 580 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 NXPE3Q969Y0 559 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 PCED1BQ96HM7 432 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ASB16Q96NS5 453 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 MKNK1Q9BUB5 465 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ATXN3LQ9H3M9 355 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 IL21Q9HBE4 155 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 APOBEC3GQ9HC16 384 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 TMEM30AQ9NV96 361 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ASB3Q9Y575 518 aa11.08□□□□□ -0.64
SNX6-208ENST00000556712 ZNF638Q14966 1978 aaKnown RBP11.08□□□□□ -0.64
SNX6-208ENST00000556712 HELZP42694 1942 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 CLDN5O00501 218 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 PSMA7O14818 248 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 SLC16A3O15427 465 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 TADA3O75528 432 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MICAL2O94851 1124 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 PRAMEF12O95522 483 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 HMGA1P17096 107 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 PTPN1P18031 435 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 VIPR2P41587 438 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 ASPAP45381 313 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MXI1P50539 228 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 STX17P56962 302 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 GPC5P78333 572 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 LRRC63Q05C16 580 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 STIM1Q13586 685 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 TAF12Q16514 161 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 CFAP221Q4G0U5 840 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 GPR158Q5T848 1215 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 BMP8AQ7Z5Y6 402 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 B3GALNT2Q8NCR0 500 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MYCBPAPQ8TBZ2 947 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 RSPRY1Q96DX4 576 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 ZNF518BQ9C0D4 1074 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 SMG9Q9H0W8 520 aaKnown RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 TMEM8AQ9HCN3 771 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
SNX6-208ENST00000556712 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MYH10P35580 1976 aa11.07□□□□□ -0.64
SNX6-208ENST00000556712 MIA3Q5JRA6 1907 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 SLC38A8A6NNN8 435 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 ECI2O75521 394 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 NPR3P17342 541 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 RPL10AP62906 217 aaKnown RBP11.06□□□□□ -0.64
SNX6-208ENST00000556712 FKBP3Q00688 224 aaKnown RBP11.06□□□□□ -0.64
SNX6-208ENST00000556712 SGSM1Q2NKQ1 1148 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 KRT39Q6A163 491 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 TTI2Q6NXR4 508 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 VITQ6UXI7 678 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 ACOT1Q86TX2 421 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 TMEM105Q8N8V8 129 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 TAF4BQ92750 862 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 SEMA4DQ92854 862 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 SMARCD2Q92925 531 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 ELSPBP1Q96BH3 223 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 DHTKD1Q96HY7 919 aaPredicted RBP11.06□□□□□ -0.64
SNX6-208ENST00000556712 FUBP3Q96I24 572 aaKnown RBP eCLIP11.06□□□□□ -0.64
SNX6-208ENST00000556712 GCNAQ96QF7 691 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 TWNKQ96RR1 684 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 IMPG2Q9BZV3 1241 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 ZFP14Q9HCL3 533 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 ARHGEF3Q9NR81 526 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 SLC2A4RGQ9NR83 387 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 FAM49BQ9NUQ9 324 aa11.06□□□□□ -0.64
SNX6-208ENST00000556712 HEPACAM2A8MVW5 462 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 F8VP50 259 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 NOL4O94818 638 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 FGF19O95750 216 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 F11P03951 625 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 CSH1P0DML2 217 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 CSH2P0DML3 217 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 P4HA1P13674 534 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 CCDC130P13994 396 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 CD58P19256 250 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 CDC25CP30307 473 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 GRIK1P39086 918 aa11.05□□□□□ -0.64
SNX6-208ENST00000556712 MAGEA11P43364 429 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms