RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 FCHO2Q0JRZ9 810 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 DPYDQ12882 1025 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 KCNB1Q14721 858 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 DDR2Q16832 855 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 ARHGAP29Q52LW3 1261 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 ZNF667Q5HYK9 610 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 STXBP5Q5T5C0 1151 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 CEP135Q66GS9 1140 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 SCARA3Q6AZY7 606 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 VSTM1Q6UX27 236 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 SCN4BQ8IWT1 228 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 CMTM8Q8IZV2 173 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 CELF5Q8N6W0 485 aaKnown RBP11.54□□□□□ -0.56
XRCC3-216ENST00000556682 MYCBPAPQ8TBZ2 947 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 BPIFB1Q8TDL5 484 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 KBTBD7Q8WVZ9 684 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 ZNF516Q92618 1163 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 PHOX2BQ99453 314 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 KCTD10Q9H3F6 313 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 C8orf33Q9H7E9 229 aaPredicted RBP11.54□□□□□ -0.56
XRCC3-216ENST00000556682 IL21Q9HBE4 155 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 GDPD2Q9HCC8 539 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 DLGAP2Q9P1A6 1054 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 NXF1Q9UBU9 619 aaKnown RBP11.54□□□□□ -0.56
XRCC3-216ENST00000556682 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
XRCC3-216ENST00000556682 TRAF3IP3Q9Y228 551 aa11.54□□□□□ -0.56
XRCC3-216ENST00000556682 ANK1P16157 1881 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 KMT2EQ8IZD2 1858 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 SLC38A8A6NNN8 435 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 IKBKBO14920 756 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 TRIM66O15016 1216 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MAPK13O15264 365 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 GFRA3O60609 400 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 HMGA1P17096 107 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 TRIM21P19474 475 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 CD72P21854 359 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 RPS9P46781 194 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 GPR15P49685 360 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 KPNA1P52294 538 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MYL6P60660 151 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 PSMC1P62191 440 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 CLDN10P78369 228 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 CYP27A1Q02318 531 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 NCOA4Q13772 614 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 ZNF699Q32M78 642 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 ZC3H14Q6PJT7 736 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 GPIHBP1Q8IV16 184 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 GUF1Q8N442 669 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MAB21L3Q8N8X9 362 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 TMC2Q8TDI7 906 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 FAM3CQ92520 227 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 NKD2Q969F2 451 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MYLPFQ96A32 169 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 TRMT2BQ96GJ1 504 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MYRFLQ96LU7 910 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MRPL45Q9BRJ2 306 aaKnown RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 MKNK1Q9BUB5 465 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 SEMA4AQ9H3S1 761 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 KIF9Q9HAQ2 790 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 SPATA6Q9NWH7 488 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-216ENST00000556682 RMND1Q9NWS8 449 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 PIAS3Q9Y6X2 628 aa11.53□□□□□ -0.56
XRCC3-216ENST00000556682 LRRIQ3A6PVS8 624 aaPredicted RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 A8MXQ7 604 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 LAMTOR5O43504 91 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 ATP2C2O75185 946 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 NOL4O94818 638 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 SMC2O95347 1197 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 F11P03951 625 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 C4BPAP04003 597 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 PRR29P0C7W0 189 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 KRT13P13646 458 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 PTPN1P18031 435 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 BDNFP23560 247 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 NR2F2P24468 414 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 CASP4P49662 377 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 PDE6CP51160 858 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 AMPD2Q01433 879 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 PPP2R5DQ14738 602 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 NFIL3Q16649 462 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 SDHAF4Q5VUM1 108 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 TDRD10Q5VZ19 366 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 CC2D1AQ6P1N0 951 aaPredicted RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 DENND5BQ6ZUT9 1274 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 INTS8Q75QN2 995 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 MON1AQ86VX9 555 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 TAF4BQ92750 862 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 CLDN23Q96B33 292 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 PCED1BQ96HM7 432 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 TNIP3Q96KP6 325 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 SPATA17Q96L03 361 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 IER2Q9BTL4 223 aa11.52□□□□□ -0.57
XRCC3-216ENST00000556682 GTPBP4Q9BZE4 634 aaKnown RBP11.52□□□□□ -0.57
XRCC3-216ENST00000556682 IMPG2Q9BZV3 1241 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms