RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TMX2Q9Y320 296 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 NOX1Q9Y5S8 564 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 DGKBQ9Y6T7 804 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 RTL1A6NKG5 1358 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 ANKRD30BQ9BXX2 1392 aa6.52□□□□□ -1.37
TDP1-215ENST00000556498 TTC21BQ7Z4L5 1316 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ZNF335Q9H4Z2 1342 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 A0A0J9YVX5 310 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 KLRG2A4D1S0 409 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 LRRIQ4A6NIV6 560 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 C16orf96A6NNT2 1141 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 C9orf172C9J069 976 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 BET1O15155 118 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 RNMTO43148 476 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 NCK2O43639 380 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 GPC4O75487 556 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 KRT75O95678 551 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ZBED1O96006 694 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ABCB1P08183 1280 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 CYP3A4P08684 503 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SNRPAP09012 282 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 CDC25CP30307 473 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 PPARGP37231 505 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 PHKA1P46020 1223 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 RENBPP51606 427 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 HSD17B4P51659 736 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 STX17P56962 302 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SRP54P61011 504 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 UBE2IP63279 158 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 OTUD4Q01804 1114 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 EXOSC9Q06265 439 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 ASPHQ12797 758 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CDC20Q12834 499 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CSTF3Q12996 717 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 ITGA9Q13797 1035 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 COTL1Q14019 142 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 LRRC41Q15345 812 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 MAPKAPK3Q16644 382 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 P3H1Q32P28 736 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CYP27C1Q4G0S4 372 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SEZ6Q53EL9 994 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 XKR9Q5GH70 373 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 FAM76BQ5HYJ3 339 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SHEQ5VZ18 495 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ZSCAN25Q6NSZ9 544 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 IDO2Q6ZQW0 420 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 UNC13DQ70J99 1090 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 REC114Q7Z4M0 266 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 GPR142Q7Z601 462 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ITIH5Q86UX2 942 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 FAM228AQ86W67 206 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 LONP2Q86WA8 852 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 EPHX4Q8IUS5 362 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 KIRREL3Q8IZU9 778 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 LZTR1Q8N653 840 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 LILRB4Q8NHJ6 448 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 TTC8Q8TAM2 541 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 DENND1AQ8TEH3 1009 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 FERMT2Q96AC1 680 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 TTC17Q96AE7 1141 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CEP170P1Q96L14 293 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 FAM20AQ96MK3 541 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 RUNDC3BQ96NL0 473 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 GBP5Q96PP8 586 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 NACC1Q96RE7 527 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ADPGKQ9BRR6 497 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 CCSER1Q9C0I3 900 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 C6orf62Q9GZU0 229 aaPredicted RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 AKTIPQ9H8T0 292 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 TUFT1Q9NNX1 390 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ANKEF1Q9NU02 776 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 USP21Q9UK80 565 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 BAG5Q9UL15 447 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 DNAJC16Q9Y2G8 782 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 HBS1LQ9Y450 684 aaKnown RBP6.51□□□□□ -1.37
TDP1-215ENST00000556498 LRRC42Q9Y546 428 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 SBNO1A3KN83 1393 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 PLEKHG1Q9ULL1 1385 aa6.51□□□□□ -1.37
TDP1-215ENST00000556498 ZMYM4Q5VZL5 1548 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 SYNJ2O15056 1496 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 ANKRD30AQ9BXX3 1397 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 ANKRD34BA5PLL1 514 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 IKBKBO14920 756 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
TDP1-215ENST00000556498 NBNO60934 754 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 ATP9AO75110 1047 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 KLHL18O94889 574 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 ALX3O95076 343 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 APBA3O96018 575 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 F2P00734 622 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 GSTA1P08263 222 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 ITGA2BP08514 1039 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 LTA4HP09960 611 aaKnown RBP6.5□□□□□ -1.37
TDP1-215ENST00000556498 TYRP1P17643 537 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 PMLP29590 882 aa6.5□□□□□ -1.37
TDP1-215ENST00000556498 HNF4AP41235 474 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms