RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TOM1L1O75674 476 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 DCTN3O75935 186 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ATG7O95352 703 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 IFNB1P01574 187 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 TNNC2P02585 160 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 TAC1P20366 129 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CA4P22748 312 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 EIF4BP23588 611 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 BRD2P25440 801 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 ICAM3P32942 547 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PDIA2Q13087 525 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 ZNF268Q14587 947 aaPredicted RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 HADHQ16836 314 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 ZNF699Q32M78 642 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 NBPF12Q5TAG4 269 aaPredicted RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 FYB2Q5VWT5 728 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 GPAT2Q6NUI2 795 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 SEPT14Q6ZU15 432 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 FAM47EQ6ZV65 393 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 FAM228AQ86W67 206 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ZBTB8OSQ8IWT0 167 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 EXOC8Q8IYI6 725 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 NIPA2Q8N8Q9 360 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CHST13Q8NET6 341 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 MAML1Q92585 1016 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 RSRC1Q96IZ7 334 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 SYNCQ9H7C4 482 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CISHQ9NSE2 258 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 EURLQ9NYK6 297 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 TELO2Q9Y4R8 837 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PPME1Q9Y570 386 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 LOC285556D6RIA3 1793 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 SSC5DA1L4H1 1573 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 F8VP50 259 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 FZD9O00144 591 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 OGTO15294 1046 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ALOX15BO15296 676 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 MAGEB2O15479 319 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 SPAG7O75391 227 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CCNB1P14635 433 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ATP2A2P16615 1042 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 ATP4AP20648 1035 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 IBSPP21815 317 aaPredicted RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 PSMA2P25787 234 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CDKN2BP42772 138 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ALDH5A1P51649 535 aaPredicted RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 ARL4CP56559 192 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 GEMIN4P57678 1058 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 MYL6P60660 151 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 KCNJ2P63252 427 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 TFAMQ00059 246 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 SP2Q02086 613 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 CAPSQ13938 189 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 RASA2Q15283 850 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 OASLQ15646 514 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 TMEM132AQ24JP5 1023 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ATP13A4Q4VNC1 1196 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 SEZ6Q53EL9 994 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 RNASEH2BQ5TBB1 312 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 CATSPERGQ6ZRH7 1159 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 RGS9BPQ6ZS82 235 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PRUNE1Q86TP1 453 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 VSIG1Q86XK7 387 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PPIL6Q8IXY8 311 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 FITM2Q8N6M3 262 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 UBR7Q8N806 425 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 ATP11CQ8NB49 1132 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 RSAD2Q8WXG1 361 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 N4BP2L2Q92802 583 aaPredicted RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 HAUS1Q96CS2 278 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 TMEM121Q9BTD3 319 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PHACTR1Q9C0D0 580 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 MTMR12Q9C0I1 747 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 NOP53Q9NZM5 478 aaKnown RBP7.36□□□□□ -1.23
TDP1-213ENST00000555880 PHTF1Q9UMS5 762 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 PCDHGC3Q9UN70 934 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 EFR3BQ9Y2G0 817 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 STK38LQ9Y2H1 464 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 USH1CQ9Y6N9 552 aa7.36□□□□□ -1.23
TDP1-213ENST00000555880 LCTP09848 1927 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 GOLGA8SH3BPF8 625 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 GAS2O43903 313 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 MAFO75444 373 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 UNC5CO95185 931 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZWINTO95229 277 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ASMTLO95671 621 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 EGFRP00533 1210 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ZSCAN5DPP0CG00 497 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 KRT3P12035 628 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ETS1P14921 441 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 CD19P15391 556 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 TCF4P15884 667 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 UBA1P22314 1058 aaKnown RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 CCND1P24385 295 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 FOXN2P32314 431 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 ELF1P32519 619 aa7.35□□□□□ -1.23
TDP1-213ENST00000555880 CDH5P33151 784 aaPredicted RBP7.35□□□□□ -1.23
TDP1-213ENST00000555880 MSH2P43246 934 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms