RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 DUOXA2Q1HG44 320 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 ZNF568Q3ZCX4 644 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 CFAP221Q4G0U5 840 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 TMCO3Q6UWJ1 677 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 PEX26Q7Z412 305 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 DAAM2Q86T65 1068 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 RHOT2Q8IXI1 618 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 SYCE1Q8N0S2 351 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 CXorf38Q8TB03 319 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 HDAC7Q8WUI4 952 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 PPP1R16BQ96T49 567 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 MTMR12Q9C0I1 747 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 XYLT2Q9H1B5 865 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 PDZD7Q9H5P4 517 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 RBM12Q9NTZ6 932 aaKnown RBP8.32□□□□□ -1.08
LINC00641-202ENST00000555688 SETD4Q9NVD3 440 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 TMEM59LQ9UK28 342 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 PCDHB2Q9Y5E7 798 aa8.32□□□□□ -1.08
LINC00641-202ENST00000555688 A0A1W2PP55 124 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 KCNK3O14649 394 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ATP8B1O43520 1251 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 F2P00734 622 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 CYP1A1P04798 512 aaPredicted RBP8.31□□□□□ -1.08
LINC00641-202ENST00000555688 TUBBP07437 444 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 MCF2P10911 925 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 TMOD1P28289 359 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 PAFAH1B1P43034 410 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 DNA2P51530 1060 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ZNF132P52740 706 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
LINC00641-202ENST00000555688 OSTNP61366 133 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ADAM17P78536 824 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 CLEC16AQ2KHT3 1053 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ZNF677Q86XU0 584 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 RASGEF1CQ8N431 466 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
LINC00641-202ENST00000555688 CPB2Q96IY4 423 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 PBKQ96KB5 322 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
LINC00641-202ENST00000555688 LRRC1Q9BTT6 524 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 FUT8Q9BYC5 575 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ADAMTS10Q9H324 1103 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ARFGAP3Q9NP61 516 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 OGFRQ9NZT2 677 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 CHORDC1Q9UHD1 332 aaPredicted RBP8.31□□□□□ -1.08
LINC00641-202ENST00000555688 AMFRQ9UKV5 643 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 L1RE1Q9UN81 338 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 ALG6Q9Y672 507 aa8.31□□□□□ -1.08
LINC00641-202ENST00000555688 A0A1B0GUA9 196 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 MBLAC1A4D2B0 266 aaPredicted RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 RRN3P2A6NIE6 340 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 LACTBL1A8MY62 500 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 HAS3O00219 553 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TSPAN1O60635 241 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 GPR32O75388 356 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 STAG3L1P0CL83 205 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 CXCL8P10145 99 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 CYP2B6P20813 491 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TBXAS1P24557 533 aaPredicted RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 ADH6P28332 368 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TM4SF4P48230 202 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 BPIFB4P59827 614 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 POU5F1Q01860 360 aaKnown RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 CRHR2Q13324 411 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 LONRF2Q1L5Z9 754 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SGSM1Q2NKQ1 1148 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SLC10A6Q3KNW5 377 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 CCDC181Q5TID7 509 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TMEM270Q6UE05 265 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 ZNF410Q86VK4 478 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 USP38Q8NB14 1042 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 ACTRT1Q8TDG2 376 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 PPP1R13LQ8WUF5 828 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SPACA7Q96KW9 195 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 COL25A1Q9BXS0 654 aaPredicted RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 BCO2Q9BYV7 579 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 UBE2OQ9C0C9 1292 aaKnown RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 DNAJB12Q9NXW2 375 aaKnown RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 KLF15Q9UIH9 416 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SIX4Q9UIU6 781 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 GTF3C4Q9UKN8 822 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 PCDHB4Q9Y5E5 795 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 TRIP12Q14669 1992 aaPredicted RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 MAP2K7O14733 419 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 ZEB2O60315 1214 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 IL18RAPO95256 599 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SMIM10L2AP0DMW4 78 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 SMIM10L2BP0DMW5 78 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 HOXA11P31270 313 aaPredicted RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 RGS2P41220 211 aa8.3□□□□□ -1.08
LINC00641-202ENST00000555688 RNASE9P60153 205 aaKnown RBP8.3□□□□□ -1.08
LINC00641-202ENST00000555688 MRPS25P82663 173 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms