RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 THEM5Q8N1Q8 247 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 SLC35G2Q8TBE7 412 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 ZNF653Q96CK0 615 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 PCED1BQ96HM7 432 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 CPXM1Q96SM3 734 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 ACBD6Q9BR61 282 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 VN1R3Q9BXE9 311 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 B3GNT5Q9BYG0 378 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 ADAM22Q9P0K1 906 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 INTUQ9ULD6 942 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 CEP83Q9Y592 693 aa10.81□□□□□ -0.68
SRP54-208ENST00000555557 LCHNA4D1U4 455 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 FANCGO15287 622 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 BEST1O76090 585 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 OAZ2O95190 189 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 FGFR3P22607 806 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 RRM1P23921 792 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 MAGEA10P43363 369 aaPredicted RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 GNG11P61952 73 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PDE4CQ08493 712 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PTP4A2Q12974 167 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PTPN20Q4JDL3 420 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PKDCCQ504Y2 493 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 INTS6LQ5JSJ4 861 aaKnown RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 CYP4A22Q5TCH4 519 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PMF1Q6P1K2 205 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 SYT10Q6XYQ8 523 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ERICH1Q86X53 443 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PHF13Q86YI8 300 aaPredicted RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 COLGALT1Q8NBJ5 622 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 MYCBPAPQ8TBZ2 947 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ZNF558Q96NG5 402 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 WDR24Q96S15 920 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 MED10Q9BTT4 135 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 RHOBTB2Q9BYZ6 727 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 HESX1Q9UBX0 185 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 CNOT8Q9UFF9 292 aaKnown RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 COG5Q9UP83 839 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 INSL6Q9Y581 213 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 CAPN6Q9Y6Q1 641 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ARHGEF37A1IGU5 675 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 GRXCR1A8MXD5 290 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 SYN3O14994 580 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 TLL1O43897 1013 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 KIF5CO60282 957 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 GJB6O95452 261 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 MMP8P22894 467 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 CACNA2D1P54289 1103 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PDCLQ13371 301 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 STILQ15468 1287 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 FAM171BQ6P995 826 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PRSS55Q6UWB4 352 aaPredicted RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 RSPO2Q6UXX9 243 aaPredicted RBP10.8□□□□□ -0.68
SRP54-208ENST00000555557 SLC39A11Q8N1S5 342 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 SLC35F6Q8N357 371 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 TXLNBQ8N3L3 684 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 FIBCD1Q8N539 461 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ANKRD52Q8NB46 1076 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 SLC35F5Q8WV83 523 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 MYLPFQ96A32 169 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PKMYT1Q99640 499 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 TTPALQ9BTX7 342 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 ZNF518BQ9C0D4 1074 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 CTTNBP2NLQ9P2B4 639 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 DNAI1Q9UI46 699 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 NR2E3Q9Y5X4 410 aa10.8□□□□□ -0.68
SRP54-208ENST00000555557 PTPRSQ13332 1948 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 C2CD2LO14523 706 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 EFEMP2O95967 443 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 ERBB2P04626 1255 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 LINC00271P0C7V0 271 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 MYOGP15173 224 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 LAG3P18627 525 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 ARPP19P56211 112 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 ETF1P62495 437 aaKnown RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 TSPY1Q01534 308 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 ELAVL2Q12926 359 aaKnown RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 MRPL58Q14197 206 aaKnown RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 SHHQ15465 462 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 PTPROQ16827 1216 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 CTXN3Q4LDR2 81 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 SLC39A12Q504Y0 691 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.79□□□□□ -0.68
SRP54-208ENST00000555557 SPATA18Q8TC71 538 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 RFFLQ8WZ73 363 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 TMEM169Q96HH4 297 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 BTBD6Q96KE9 485 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 SLC9A7Q96T83 725 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 RAD9AQ99638 391 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 GOLPH3Q9H4A6 298 aa10.79□□□□□ -0.68
SRP54-208ENST00000555557 TMEM30AQ9NV96 361 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms