RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DLK2Q6UY11 383 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 PPP1R3BQ86XI6 285 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 RITA1Q96K30 269 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 C5orf34Q96MH7 638 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 VPS16Q9H269 839 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 SLAMF7Q9NQ25 335 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 PDGFCQ9NRA1 345 aa4.74□□□□□ -1.65
SNX6-204ENST00000555541 SHTN1A0MZ66 631 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 KCNU1A8MYU2 1149 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 ERC2O15083 957 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 TLR5O60602 858 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 TJP3O95049 919 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 SMARCA1P28370 1054 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 UAP1L1Q3KQV9 507 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 NAPRTQ6XQN6 538 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 ZNF804AQ7Z570 1209 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 ZDHHC17Q8IUH5 632 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 FAM46DQ8NEK8 389 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 SIK2Q9H0K1 926 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 TUBA8Q9NY65 449 aaPredicted RBP4.73□□□□□ -1.65
SNX6-204ENST00000555541 HESX1Q9UBX0 185 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 POLHQ9Y253 713 aa4.73□□□□□ -1.65
SNX6-204ENST00000555541 TNKSO95271 1327 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 QSOX1O00391 747 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 AHSGP02765 367 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 ENGP17813 658 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 CCKARP32238 428 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 LINC00205P59089 165 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 NOGQ13253 232 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 SFRP4Q6FHJ7 346 aaPredicted RBP4.72□□□□□ -1.65
SNX6-204ENST00000555541 CYP2W1Q8TAV3 490 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 SLC46A1Q96NT5 459 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 ASB2Q96Q27 587 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 PPP1R10Q96QC0 940 aaKnown RBP4.72□□□□□ -1.65
SNX6-204ENST00000555541 WDCPQ9H6R7 721 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 SERTAD3Q9UJW9 196 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 ADAMTS5Q9UNA0 930 aa4.72□□□□□ -1.65
SNX6-204ENST00000555541 CCDC187A0A096LP49 1063 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 E5RJQ4 531 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 M0QYG6 137 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 IGSF3O75054 1194 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 ARIH2O95376 493 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 FESP07332 822 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 PDCP20941 246 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 CDK11BP21127 795 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 ARHGAP25P42331 645 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 CDKN1CP49918 316 aaPredicted RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 RABEP1Q15276 862 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 TRIP6Q15654 476 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 FCRL6Q6DN72 434 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 PARS2Q7L3T8 475 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 HEATR3Q7Z4Q2 680 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 PNLDC1Q8NA58 520 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 RP9Q8TA86 221 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 ATG4AQ8WYN0 398 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 DDX17Q92841 729 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 TNPO1Q92973 898 aaKnown RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 SLC13A1Q9BZW2 595 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.71□□□□□ -1.66
SNX6-204ENST00000555541 ABCF2Q9UG63 623 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 WDR17Q8IZU2 1322 aa4.71□□□□□ -1.66
SNX6-204ENST00000555541 SBNO2Q9Y2G9 1366 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 TYRP14679 529 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 GUCY2FP51841 1108 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 Q4G0T1 1027 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 EFCAB2Q5VUJ9 269 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 TRIM72Q6ZMU5 477 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 ADAMTS15Q8TE58 950 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 GLG1Q92896 1179 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 LENG8Q96PV6 779 aaPredicted RBP4.7□□□□□ -1.66
SNX6-204ENST00000555541 PTDSS2Q9BVG9 487 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 GABRQQ9UN88 632 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 AFG3L2Q9Y4W6 797 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 MRFAP1Q9Y605 127 aa4.7□□□□□ -1.66
SNX6-204ENST00000555541 CADPSQ9ULU8 1353 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 A1L4Q6 167 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 H7C1Q1 480 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 FCHO1O14526 889 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 SLC16A6O15403 523 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 HDCP19113 662 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 PPIFP30405 207 aaKnown RBP4.69□□□□□ -1.66
SNX6-204ENST00000555541 MMP13P45452 471 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 MAP2K6P52564 334 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 AMPD3Q01432 767 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 ITKQ08881 620 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 ZNF260Q3ZCT1 412 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 MIDNQ504T8 468 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 EMC10Q5UCC4 262 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 Q6ZWC4 215 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 IRF2BP2Q7Z5L9 587 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 COQ8BQ96D53 544 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 MTMR8Q96EF0 704 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 HMCESQ96FZ2 354 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 TTYH3Q9C0H2 523 aa4.69□□□□□ -1.66
SNX6-204ENST00000555541 TCRBV5S1A1TA0A578 114 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 KATNA1O75449 491 aa4.68□□□□□ -1.66
SNX6-204ENST00000555541 CYP2A6P11509 494 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms