RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ZNF638Q14966 1978 aaKnown RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 CEP295Q9C0D2 2601 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 C2orf78A6NCI8 922 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 TNFRSF10BO14763 440 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 XPOTO43592 962 aaKnown RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 FAM189A1O60320 539 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 CFIP05156 583 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 PLS3P13797 630 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 CYP2F1P24903 491 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 TIE1P35590 1138 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SLC6A11P48066 632 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SMTNP53814 917 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ZXDBP98169 803 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 FAM160A1Q05DH4 1040 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 MESP2Q0VG99 397 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ST3GAL1Q11201 340 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 PDIA5Q14554 519 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ZNF268Q14587 947 aaPredicted RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 SAFBQ15424 915 aaKnown RBP eCLIP9.04□□□□□ -0.96
NEK9-206ENST00000555537 CCDC142Q17RM4 750 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SCARA3Q6AZY7 606 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 LPCAT2Q7L5N7 544 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 C11orf74Q86VG3 221 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 METTL23Q86XA0 190 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SYT12Q8IV01 421 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ALLCQ8N6M5 410 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 PNPLA1Q8N8W4 532 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 TXNDC5Q8NBS9 432 aaKnown RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 OLIG1Q8TAK6 271 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SPPL2BQ8TCT7 592 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SH3RF2Q8TEC5 729 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ATP2A3Q93084 1043 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 MMTAG2Q9BU76 263 aaKnown RBP9.04□□□□□ -0.96
NEK9-206ENST00000555537 C17orf75Q9HAS0 396 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 PCDHB5Q9Y5E4 795 aa9.04□□□□□ -0.96
NEK9-206ENST00000555537 DENND4CQ5VZ89 1909 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 KIAA1549LQ6ZVL6 1849 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ASCC3Q8N3C0 2202 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 IGF2RP11717 2491 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ANO9A1A5B4 782 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 FAM221BA6H8Z2 402 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 SGK1O00141 431 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 SCAMP3O14828 347 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 OGTO15294 1046 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 EPB41L2O43491 1005 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 KLF8O95600 359 aaPredicted RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 CKMP06732 381 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ADRB2P07550 413 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 USP17L7P0C7H9 530 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 CSH1P0DML2 217 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 CSH2P0DML3 217 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 CD59P13987 128 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ACAT1P24752 427 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 GUCY2CP25092 1073 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 RDXP35241 583 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 P2RY2P41231 377 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ACOT2P49753 483 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 LIG4P49917 911 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ATXN3P54252 364 aaPredicted RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 NR1H3Q13133 447 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 GAB4Q2WGN9 574 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 MAP7D1Q3KQU3 841 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 KRT79Q5XKE5 535 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 SLC23A3Q6PIS1 610 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 RAB44Q7Z6P3 723 aaPredicted RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 DCP1BQ8IZD4 617 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 PGBD3Q8N328 593 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 HDDC3Q8N4P3 179 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 IGSF22Q8N9C0 903 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 MDM1Q8TC05 714 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 C2orf15Q8WU43 125 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 HMGB4Q8WW32 186 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 GCNT4Q9P109 453 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 BCCIPQ9P287 314 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEK9-206ENST00000555537 CPSF3Q9UKF6 684 aaKnown RBP9.03□□□□□ -0.96
NEK9-206ENST00000555537 PILRBQ9UKJ0 227 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 ZFYVE26Q68DK2 2539 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 TSC2P49815 1807 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 LOC400499M0QZD8 3231 aa9.03□□□□□ -0.96
NEK9-206ENST00000555537 PTPRDP23468 1912 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TRAV19A0A0A6YYK7 116 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TISP43B9A030 160 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 ANKRD63C9JTQ0 380 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 H0Y626 953 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 HCRTO43612 131 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 SH3BP5O60239 455 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 OPHN1O60890 802 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 ALDH1A2O94788 518 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TRIM16O95361 564 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 HDCP19113 662 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TAF6P49848 677 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TOB1P50616 345 aaPredicted RBP9.02□□□□□ -0.97
NEK9-206ENST00000555537 USP4Q13107 963 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 TMEM132DQ14C87 1099 aa9.02□□□□□ -0.97
NEK9-206ENST00000555537 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms