RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 IPO4Q8TEX9 1081 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 ZNF558Q96NG5 402 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 CPXM1Q96SM3 734 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 SEPT5Q99719 369 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 LRRC4Q9HBW1 653 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 ALG13Q9NP73 1137 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 NR2E3Q9Y5X4 410 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 E5RJQ4 531 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 SPOPO43791 374 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 CYP2F1P24903 491 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 LHX1P48742 406 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 FAM102AQ5T9C2 384 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 PMF1Q6P1K2 205 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 DNAJC24Q6P3W2 148 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 TMC7Q7Z402 723 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 ADAT2Q7Z6V5 191 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 LRRTM3Q86VH5 581 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 TTC30AQ86WT1 665 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 SPATA2LQ8IUW3 424 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 MCOLN2Q8IZK6 566 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 FIBCD1Q8N539 461 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 TOP6BLQ8N6T0 577 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 OR10T2Q8NGX3 314 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 BCL7CQ8WUZ0 217 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 RNPC3Q96LT9 517 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 SELENOOQ9BVL4 669 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 DNAI2Q9GZS0 605 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 ELAC1Q9H777 363 aaKnown RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 CRTAC1Q9NQ79 661 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 GDAP2Q9NXN4 497 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
NEK9-205ENST00000555405 MAGED2Q9UNF1 606 aaPredicted RBP10.79□□□□□ -0.68
NEK9-205ENST00000555405 BEST1O76090 585 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 CNGA2Q16280 664 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 PTPN20Q4JDL3 420 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 RTP2Q5QGT7 225 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 TXLNBQ8N3L3 684 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 ZNF564Q8TBZ8 553 aaPredicted RBP10.78□□□□□ -0.68
NEK9-205ENST00000555405 MYLPFQ96A32 169 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 MCEEQ96PE7 176 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 TSGA10Q9BZW7 698 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 VRTNQ9H8Y1 702 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 TMLHEQ9NVH6 421 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
NEK9-205ENST00000555405 PAEPP09466 180 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 OR1D2P34982 312 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 RFC2P35250 354 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 NDUFV1P49821 464 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 ATP11AP98196 1134 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 DSC1Q08554 894 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 TAF5Q15542 800 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 DDR2Q16832 855 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 SCYL2Q6P3W7 929 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 PEX26Q7Z412 305 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 WDTC1Q8N5D0 677 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEK9-205ENST00000555405 NUDT5Q9UKK9 219 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.78□□□□□ -0.68
NEK9-205ENST00000555405 CDY1Q9Y6F8 540 aa10.78□□□□□ -0.68
NEK9-205ENST00000555405 V9GYY5 206 aaPredicted RBP10.78□□□□□ -0.68
NEK9-205ENST00000555405 CTAGE9A4FU28 777 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 SPDYE4A6NLX3 237 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 MYO1FO00160 1098 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 RPL7AP62424 266 aaKnown RBP10.77□□□□□ -0.68
NEK9-205ENST00000555405 VPS52Q8N1B4 723 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 CLEC4CQ8WTT0 213 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 SUSD3Q96L08 255 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 UROC1Q96N76 676 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 PLEKHA4Q9H4M7 779 aa10.77□□□□□ -0.68
NEK9-205ENST00000555405 SF3B1O75533 1304 aaKnown RBP eCLIP10.77□□□□□ -0.69
NEK9-205ENST00000555405 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 F8VP50 259 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 ATP1A1P05023 1023 aaKnown RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 FAM200BP0CF97 657 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 CTNNB1P35222 781 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 ZNF132P52740 706 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 ODF2Q5BJF6 829 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 CD300LGQ6UXG3 332 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 UNC93AQ86WB7 457 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 FUKQ8N0W3 1084 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 ACSF2Q96CM8 615 aaPredicted RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 HINFPQ9BQA5 517 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 METTL5Q9NRN9 209 aaKnown RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 CDH23Q9H251 3354 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 MAGEA10P43363 369 aaPredicted RBP10.77□□□□□ -0.69
NEK9-205ENST00000555405 INCA1Q0VD86 236 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 SHHQ15465 462 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 TAF12Q16514 161 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 PIGZQ86VD9 579 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
NEK9-205ENST00000555405 TTC9BQ8N6N2 239 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms