RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 MMP3P08254 477 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 IQSEC1Q6DN90 963 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 TTC25Q96NG3 672 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 CPXM1Q96SM3 734 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 DDX23Q9BUQ8 820 aaKnown RBP22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 PCDH9Q9HC56 1237 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 AGAP1Q9UPQ3 857 aa22.39■■□□□ 1.17
ARHGEF40-204ENST00000555038 C3orf70A6NLC5 250 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 SMIM23A6NLE4 172 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 CHN1P15882 459 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 IFI35P80217 286 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 STAT4Q14765 748 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 MORF4L2Q15014 288 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 DGKDQ16760 1214 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 P3H1Q32P28 736 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 UBAP2Q5T6F2 1119 aaKnown RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 DPP9Q86TI2 863 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 RIBC1Q8N443 379 aaPredicted RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 SLC35B2Q8TB61 432 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 PPM1EQ8WY54 764 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 CHMP6Q96FZ7 201 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 TWNKQ96RR1 684 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 SELENOSQ9BQE4 189 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 PHACTR1Q9C0D0 580 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 DPP3Q9NY33 737 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 LGALS13Q9UHV8 139 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 GPD2P43304 727 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 VPS41P49754 854 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 BBS12Q6ZW61 710 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 GPR142Q7Z601 462 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 JOSD2Q8TAC2 188 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 UHMK1Q8TAS1 419 aaKnown RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 ATXN2LQ8WWM7 1075 aaKnown RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 MAML3Q96JK9 1138 aa22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 TPX2Q9ULW0 747 aaKnown RBP22.38■■□□□ 1.17
ARHGEF40-204ENST00000555038 UTRNP46939 3433 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 M0QYV0 167 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 ERBB2P04626 1255 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 RDXP35241 583 aaKnown RBP22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 PCK1P35558 622 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 KYNUQ16719 465 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 MARCH8Q5T0T0 291 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 TXNRD3NBQ6F5E7 133 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 LCLAT1Q6UWP7 414 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 PCGF5Q86SE9 256 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 KIAA0319LQ8IZA0 1049 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 OR6J1Q8NGC5 347 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 BRI3BPQ8WY22 251 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 PARK7Q99497 189 aaKnown RBP22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 METTL5Q9NRN9 209 aaKnown RBP22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 INTS9Q9NV88 658 aaKnown RBP22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 ASNSD1Q9NWL6 643 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 SHOC2Q9UQ13 582 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 ZNF236Q9UL36 1845 aa22.37■■□□□ 1.17
ARHGEF40-204ENST00000555038 RALGAPA2Q2PPJ7 1873 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 RNF8O76064 485 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 SMPD1P17405 629 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 SLCO1A2P46721 670 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 ARSEP51690 589 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 FAM110CQ1W6H9 321 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 C10orf67Q8IYJ2 551 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 HEXIM2Q96MH2 286 aaKnown RBP22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 CFAP57Q96MR6 1250 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 FAM118BQ9BPY3 351 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 TINF2Q9BSI4 451 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 NT5C1AQ9BXI3 368 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 SLC5A4Q9NY91 659 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 HMGXB4Q9UGU5 601 aa22.36■■□□□ 1.17
ARHGEF40-204ENST00000555038 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 CDH16O75309 829 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 CSDE1O75534 798 aaKnown RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 KDELR1P24390 212 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 ACVR2BQ13705 512 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 LONRF1Q17RB8 773 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 C6orf89Q6UWU4 347 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 PLEKHH3Q7Z736 793 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 EXOC3L1Q86VI1 746 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 ARFGAP1Q8N6T3 406 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 CMASQ8NFW8 434 aaPredicted RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 MDM1Q8TC05 714 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 RBM15Q96T37 977 aaKnown RBP eCLIP22.35■■□□□ 1.172e-6■■■□□ 17.2
ARHGEF40-204ENST00000555038 PPCSQ9HAB8 311 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 ACTL7BQ9Y614 415 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 SMAPO00193 183 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 MAGEA4P43358 317 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 GKAP1Q5VSY0 366 aaPredicted RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 ARHGEF2Q92974 986 aaKnown RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 KIF12Q96FN5 646 aa22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 GCOM2Q9BZD3 368 aaPredicted RBP22.35■■□□□ 1.17
ARHGEF40-204ENST00000555038 CITO14578 2027 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 TRIM66O15016 1216 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 SETSIPP0DME0 302 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 DRD4P21917 467 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 ZNF143P52747 638 aaPredicted RBP22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 NDST1P52848 882 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 CPLX4Q7Z7G2 160 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 TADA2BQ86TJ2 420 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 OTUD6BQ8N6M0 293 aa22.34■■□□□ 1.17
ARHGEF40-204ENST00000555038 P3H4Q92791 437 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms