RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GPNMBQ14956 572 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 RSPH3Q86UC2 560 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 ERICH1Q86X53 443 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TOP6BLQ8N6T0 577 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 C3orf58Q8NDZ4 430 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 LINC01599Q8WXQ3 324 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 PIWIL1Q96J94 861 aaKnown RBP9.41□□□□□ -0.9
TDP1-210ENST00000554976 ZFP42Q96MM3 310 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 LPIN3Q9BQK8 851 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 LRRC19Q9H756 370 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 PADI3Q9ULW8 664 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 GIT1Q9Y2X7 761 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 GPR182O15218 404 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 CTSHP09668 335 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 RARAP10276 462 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 HSPA6P17066 643 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 LMO2P25791 158 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 CD52P31358 61 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 CARSP49589 748 aaKnown RBP9.41□□□□□ -0.9
TDP1-210ENST00000554976 STILQ15468 1287 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TXNRD3NBQ6F5E7 133 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TMEM110Q86TL2 294 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 RTN4RL1Q86UN2 441 aaPredicted RBP9.41□□□□□ -0.9
TDP1-210ENST00000554976 MREGQ8N565 214 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 ZNF560Q96MR9 790 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 APOL6Q9BWW8 343 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TXLNGYQ9BZA5 131 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 TRIM6Q9C030 488 aaPredicted RBP9.41□□□□□ -0.9
TDP1-210ENST00000554976 HPCAL4Q9UM19 191 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 SNX9Q9Y5X1 595 aa9.41□□□□□ -0.9
TDP1-210ENST00000554976 ARL5CA6NH57 179 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 F8VP50 259 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 MYO1FO00160 1098 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 DPYSL4O14531 572 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 ERLIN1O75477 346 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 FAM153BP0C7A2 387 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 MLH1P40692 756 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 TAF6P49848 677 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 ARSEP51690 589 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PRMT2P55345 433 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 GOLGA7BQ2TAP0 167 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 FAM153CQ494X1 144 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 SV2CQ496J9 727 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 DUPD1Q68J44 220 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 DPH6Q7L8W6 267 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 RNF180Q86T96 592 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 KLHL7Q8IXQ5 586 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 ZNF784Q8NCA9 323 aaPredicted RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 EXD1Q8NHP7 514 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 STK32AQ8WU08 396 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PIK3R5Q8WYR1 880 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 AMACRQ9UHK6 382 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 FAM153AQ9UHL3 310 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PTPRSQ13332 1948 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 A0A0U1RQF3 1178 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 M0QYV0 167 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 M0QZ92 97 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 AGPSO00116 658 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 TTI1O43156 1089 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 SPOPO43791 374 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 MYCNP04198 464 aaPredicted RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 SETSIPP0DME0 302 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 CKBP12277 381 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 TKTP29401 623 aaKnown RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 THPOP40225 353 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 UPP1Q16831 310 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PMF1Q6P1K2 205 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 DNAJC24Q6P3W2 148 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 PAQR9Q6ZVX9 377 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 RHOT1Q8IXI2 618 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 LPPQ93052 612 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 HEXIM2Q96MH2 286 aaKnown RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 SLITRK1Q96PX8 696 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.9
TDP1-210ENST00000554976 PKMYT1Q99640 499 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 EPB41L5Q9HCM4 733 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 ZDHHC18Q9NUE0 388 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.9
TDP1-210ENST00000554976 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.91
TDP1-210ENST00000554976 FKTNO75072 461 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 LRCH4O75427 683 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 ENDOD1O94919 500 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 IL1R2P27930 398 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 RAB27AP51159 221 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 EPHB4P54760 987 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 DHX34Q14147 1143 aaKnown RBP9.39□□□□□ -0.91
TDP1-210ENST00000554976 PIGHQ14442 188 aaPredicted RBP9.39□□□□□ -0.91
TDP1-210ENST00000554976 SEL1L2Q5TEA6 688 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 HDXQ7Z353 690 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 BNIPLQ7Z465 357 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 POLNQ7Z5Q5 900 aa9.39□□□□□ -0.91
TDP1-210ENST00000554976 ACOT1Q86TX2 421 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms