RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
SYNE2-214ENST00000554928 ZNF512Q96ME7 567 aaPredicted RBP13.18□□□□□ -0.3
SYNE2-214ENST00000554928 ZSWIM3Q96MP5 696 aa13.18□□□□□ -0.3
SYNE2-214ENST00000554928 IL21Q9HBE4 155 aa13.18□□□□□ -0.3
SYNE2-214ENST00000554928 MRPS23Q9Y3D9 190 aaKnown RBP13.18□□□□□ -0.3
SYNE2-214ENST00000554928 BDP1A6H8Y1 2624 aa13.18□□□□□ -0.3
SYNE2-214ENST00000554928 NCOR1O75376 2440 aa13.18□□□□□ -0.3
SYNE2-214ENST00000554928 STX10O60499 249 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 FAM163BP0C2L3 166 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 LAMP2P13473 410 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 CCDC130P13994 396 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 HMGA1P17096 107 aaKnown RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 TUFMP49411 452 aaKnown RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 EPHB3P54753 998 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 APBA1Q02410 837 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 PLD1Q13393 1074 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 TEAD2Q15562 447 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 NFE2Q16621 373 aaPredicted RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 CAVIN1Q6NZI2 390 aaKnown RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 PARM1Q6UWI2 310 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 PSMG2Q969U7 264 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 AVENQ9NQS1 362 aaPredicted RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
SYNE2-214ENST00000554928 EPS15L1Q9UBC2 864 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
SYNE2-214ENST00000554928 NCANO14594 1321 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 A0A1W2PRU2 124 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 FAM86C2PA6NEL3 165 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 NARSO43776 548 aaKnown RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 CILPO75339 1184 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 GNA14O95837 355 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 CALCAP01258 141 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 AFPP02771 609 aaKnown RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ERCC5P28715 1186 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 USP46P62068 366 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 CYP4F8P98187 520 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 INCA1Q0VD86 236 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 SMARCB1Q12824 385 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 PDZD4Q76G19 769 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ELMOD1Q8N336 334 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 UBR7Q8N806 425 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 FGF14Q92915 247 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ACSF2Q96CM8 615 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 IMPG2Q9BZV3 1241 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 FAM49BQ9NUQ9 324 aa13.16□□□□□ -0.3
SYNE2-214ENST00000554928 MAGEC2Q9UBF1 373 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SYNE2-214ENST00000554928 SLC38A8A6NNN8 435 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 F8VP50 259 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 PI4K2BG5E9Z4 385 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 DCXO43602 365 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 TADA3O75528 432 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 BEST1O76090 585 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 P4HA1P13674 534 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 GABRR2P28476 465 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 MAGEA11P43364 429 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 HTR4Q13639 388 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 ASTLQ6HA08 431 aaPredicted RBP13.15□□□□□ -0.3
SYNE2-214ENST00000554928 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 CRYBG2Q8N1P7 616 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 ZMIZ2Q8NF64 920 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 SLC2A14Q8TDB8 520 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 FUBP3Q96I24 572 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYNE2-214ENST00000554928 KCNK16Q96T55 309 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 CRACR2AQ9BSW2 395 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 PLA2G2FQ9BZM2 168 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 INTS2Q9H0H0 1204 aaKnown RBP13.15□□□□□ -0.3
SYNE2-214ENST00000554928 THAP9Q9H5L6 903 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 CYP3A43Q9HB55 503 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 CISHQ9NSE2 258 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYNE2-214ENST00000554928 MAGED2Q9UNF1 606 aaPredicted RBP13.15□□□□□ -0.3
SYNE2-214ENST00000554928 NUMBLQ9Y6R0 609 aa13.15□□□□□ -0.3
SYNE2-214ENST00000554928 ANHXE9PGG2 379 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 PMM2O15305 246 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 NOL4O94818 638 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 FCARP24071 287 aa13.14□□□□□ -0.31
SYNE2-214ENST00000554928 ADORA2BP29275 332 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms