RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 IL1RAPL1Q9NZN1 696 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HAO1Q9UJM8 370 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MYO1GB0I1T2 1018 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MED24O75448 989 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CYP2C8P10632 490 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 EZH2Q15910 746 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 DCAF4L1Q3SXM0 396 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 NT5DC1Q5TFE4 455 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MICU2Q8IYU8 434 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HIC2Q96JB3 615 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 KCNMA1Q12791 1236 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 OVGP1Q12889 678 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 STX5Q13190 355 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 GOLGA7BQ2TAP0 167 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FBXO25Q8TCJ0 367 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FAM151AQ8WW52 585 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 DCLRE1BQ9H816 532 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MAP3K20Q9NYL2 800 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 DTNAQ9Y4J8 743 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CES2O00748 559 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 TNPO2O14787 897 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HIST1H2AGP0C0S8 130 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HIST1H2ADP20671 130 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 KCNK10P57789 538 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CYP4A22Q5TCH4 519 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 LINC00523Q86TU6 105 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 SHCBP1Q8NEM2 672 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HIST1H2AHQ96KK5 128 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 HIST1H2AJQ99878 128 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 H2AFJQ9BTM1 129 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CATSPERBQ9H7T0 1116 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 RIC8BQ9NVN3 520 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 DCDC2Q9UHG0 476 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CNOT7Q9UIV1 285 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FAM32AQ9Y421 112 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FARP1Q9Y4F1 1045 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 ATP6V1B1P15313 513 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 CYP11B1P15538 503 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MCL1Q07820 350 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 GIT2Q14161 759 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 NTRK3Q16288 839 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 TFDP3Q5H9I0 405 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 MFN1Q8IWA4 741 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 C2orf69Q8N8R5 385 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FBXO36Q8NEA4 188 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 TFB1MQ8WVM0 346 aaKnown RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 BTN2A2Q8WVV5 523 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 ATG4AQ8WYN0 398 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 GPRASP2Q96D09 838 aa14.51□□□□□ -0.09
VTI1B-204ENST00000554659 ILKAPQ9H0C8 392 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
VTI1B-204ENST00000554659 FRMPD1Q5SYB0 1578 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 F8VZ95 297 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 GLI1P08151 1106 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 CALB2P22676 271 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 SV2CQ496J9 727 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 C11orf63Q6NUN7 778 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ZNF571Q7Z3V5 609 aaPredicted RBP14.5□□□□□ -0.09
VTI1B-204ENST00000554659 SLC24A2Q9UI40 661 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 CCDC78A2IDD5 438 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ZNF263O14978 683 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 TRAPPC3O43617 180 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 SEC23AQ15436 765 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 TNIP2Q8NFZ5 429 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 DDI1Q8WTU0 396 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 FAM49BQ9NUQ9 324 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ZNF70Q9UC06 446 aaPredicted RBP14.5□□□□□ -0.09
VTI1B-204ENST00000554659 SEPT3Q9UH03 358 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 C1orf167Q5SNV9 1468 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 LZTS3O60299 673 aaPredicted RBP14.5□□□□□ -0.09
VTI1B-204ENST00000554659 PDGFRBP09619 1106 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 PTENP60484 403 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 LRRC74AQ0VAA2 488 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 MTM1Q13496 603 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 OR6J1Q8NGC5 347 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ANKRD27Q96NW4 1050 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.5□□□□□ -0.096e-6■■■■□ 21.4
VTI1B-204ENST00000554659 SLC39A10Q9ULF5 831 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 NUDT2P50583 147 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ADRM1Q16186 407 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 CCDC142Q17RM4 750 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 CEP78Q5JTW2 689 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 HDDC2Q7Z4H3 204 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 UBA3Q8TBC4 463 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 DCUN1D1Q96GG9 259 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 KAZALD1Q96I82 304 aa14.5□□□□□ -0.09
VTI1B-204ENST00000554659 TARS2Q9BW92 718 aaKnown RBP14.5□□□□□ -0.09
VTI1B-204ENST00000554659 ZC3H13Q5T200 1668 aaKnown RBP14.49□□□□□ -0.09
VTI1B-204ENST00000554659 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
VTI1B-204ENST00000554659 THRAP10827 490 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 SARSP49591 514 aaKnown RBP14.49□□□□□ -0.09
VTI1B-204ENST00000554659 TBX2Q13207 712 aaPredicted RBP14.49□□□□□ -0.09
VTI1B-204ENST00000554659 VEPH1Q14D04 833 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 SUPT3HB4E1H0 165 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 DGKIO75912 1065 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 FKBP9O95302 570 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 PSMD7P51665 324 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 SPDYAQ5MJ70 313 aa14.49□□□□□ -0.09
VTI1B-204ENST00000554659 FKBP9P1Q75LS8 142 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms