RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 GOLGA6L10A6NI86 522 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 BTNL10A8MVZ5 291 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 TMCO5BA8MYB1 307 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 HMGB1P1B2RPK0 211 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 FGF10O15520 208 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 STK10O94804 968 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 CD3EP07766 207 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 RARBP10826 455 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 GNA11P29992 359 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 PRCPP42785 496 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 TNNC1P63316 161 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 MRPS5P82675 430 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 DUSP4Q13115 394 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 COG2Q14746 738 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 KCNMB1Q16558 191 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 MAN2A1Q16706 1144 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 ABCB5Q2M3G0 1257 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 CERKLQ49MI3 558 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 HSP90AA4PQ58FG1 418 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 FAM47AQ5JRC9 791 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 SPDYCQ5MJ68 293 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 CFAP58Q5T655 872 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 MCTP2Q6DN12 878 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 TTI2Q6NXR4 508 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 C8orf74Q6P047 294 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 LRIG3Q6UXM1 1119 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 GRAMD1CQ8IYS0 662 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 BVESQ8NE79 360 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 ASIC4Q96FT7 647 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 CALML4Q96GE6 196 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 FCRL2Q96LA5 508 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 TOX2Q96NM4 488 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 NOX5Q96PH1 765 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 ASB2Q96Q27 587 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 UHRF1Q96T88 793 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 TSG101Q99816 390 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 MOV10L1Q9BXT6 1211 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 IFIH1Q9BYX4 1025 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 SPATC1LQ9H0A9 340 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 EPC1Q9H2F5 836 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 MROH8Q9H579 483 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 RPAP3Q9H6T3 665 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 SH2D4AQ9H788 454 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 XPNPEP3Q9NQH7 507 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 SAP30BPQ9UHR5 308 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 REXO2Q9Y3B8 237 aaKnown RBP6.4□□□□□ -1.38
VPS33B-203ENST00000554264 DAAM1Q9Y4D1 1078 aa6.4□□□□□ -1.38
VPS33B-203ENST00000554264 RLFQ13129 1914 aa6.4□□□□□ -1.39
VPS33B-203ENST00000554264 ROBO3Q96MS0 1386 aa6.4□□□□□ -1.39
VPS33B-203ENST00000554264 BAZ2AQ9UIF9 1905 aaKnown RBP6.4□□□□□ -1.39
VPS33B-203ENST00000554264 TTC28Q96AY4 2481 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 SIPA1L1O43166 1804 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ZNF236Q9UL36 1845 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 NAV1Q8NEY1 1877 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 A0A1W2PQ45 241 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 A0A1W2PQY0 241 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ESYT2A0FGR8 921 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 FITM1A5D6W6 292 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 AURKAO14965 403 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 PQBP1O60828 265 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 CAPNS1P04632 268 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ATP1A1P05023 1023 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ITGAVP06756 1048 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 GLI1P08151 1106 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ITGB8P26012 769 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 KIR2DL1P43626 348 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 KIR2DL2P43627 348 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 MTIF2P46199 727 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ZNF143P52747 638 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 POU4F1Q01851 419 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 PPIGQ13427 754 aaKnown RBP eCLIP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 BIRC3Q13489 604 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 CUL1Q13616 776 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 GRM4Q14833 912 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ZNF174Q15697 407 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 NPY5RQ15761 445 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 TMEM266Q2M3C6 531 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 NCAPH2Q6IBW4 605 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 WDR59Q6PJI9 974 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 KDM7AQ6ZMT4 941 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 CEP128Q6ZU80 1094 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 PIK3AP1Q6ZUJ8 805 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 USP49Q70CQ1 688 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ANKRD33Q7Z3H0 272 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ADGRA1Q86SQ6 560 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 SLCO6A1Q86UG4 719 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 OXR1Q8N573 874 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 C4orf32Q8N8J7 132 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ANKS4BQ8N8V4 417 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 ACER1Q8TDN7 264 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 LRRC45Q96CN5 670 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 MAML3Q96JK9 1138 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 MMS19Q96T76 1030 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 MYCBPQ99417 103 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 RIOK1Q9BRS2 568 aaKnown RBP6.39□□□□□ -1.39
VPS33B-203ENST00000554264 C1QTNF1Q9BXJ1 281 aa6.39□□□□□ -1.39
VPS33B-203ENST00000554264 KAT14Q9H8E8 782 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms