RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 C12orf29Q8N999 325 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 COLGALT1Q8NBJ5 622 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 SLC2A14Q8TDB8 520 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 IPO4Q8TEX9 1081 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 CPA5Q8WXQ8 436 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 ZNF653Q96CK0 615 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 TMEM169Q96HH4 297 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 IGSF21Q96ID5 467 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 C16orf45Q96MC5 204 aaPredicted RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 RAD9AQ99638 391 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 PKMYT1Q99640 499 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 RTP3Q9BQQ7 232 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 TTPALQ9BTX7 342 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 THAP2Q9H0W7 228 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 DPEP3Q9H4B8 488 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CRTAC1Q9NQ79 661 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 FAM49BQ9NUQ9 324 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ADAM22Q9P0K1 906 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 WDR35Q9P2L0 1181 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 UVRAGQ9P2Y5 699 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 HCSTQ9UBK5 93 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 LCMT1Q9UIC8 334 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 ZMYND8Q9ULU4 1186 aaPredicted RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 GUCA1BQ9UMX6 200 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 RWDD3Q9Y3V2 267 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 PCDHGC5Q9Y5F6 944 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 TIMM13Q9Y5L4 95 aaPredicted RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 MRPL42Q9Y6G3 142 aaKnown RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 SCINQ9Y6U3 715 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 FNDC1Q4ZHG4 1894 aaPredicted RBP8.1□□□□□ -1.11
TDP1-209ENST00000554180 TSC2P49815 1807 aa8.1□□□□□ -1.11
TDP1-209ENST00000554180 A0A0U1RQJ8 604 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 XPO1O14980 1071 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 HCRTO43612 131 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 SOD2P04179 222 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FAM200BP0CF97 657 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 CCDC130P13994 396 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 ACAT1P24752 427 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 SCNN1AP37088 669 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 ACADSBP45954 432 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 RPL34P49207 117 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 GNG11P61952 73 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PSMC1P62191 440 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 TAP1Q03518 808 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PTP4A2Q12974 167 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 NFE2Q16621 373 aaPredicted RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 PTPN20Q4JDL3 420 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 MDH1BQ5I0G3 518 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 SPOUT1Q5T280 376 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 KIAA0319Q5VV43 1072 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PLEKHA7Q6IQ23 1121 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FAM117BQ6P1L5 589 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 MMS22LQ6ZRQ5 1243 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FAM35AQ86V20 835 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 TTC30AQ86WT1 665 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 TMEM173Q86WV6 379 aaPredicted RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 ZDHHC17Q8IUH5 632 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 DCP1BQ8IZD4 617 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 SYCE1Q8N0S2 351 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FUKQ8N0W3 1084 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FIBCD1Q8N539 461 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 WDTC1Q8N5D0 677 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 C3orf20Q8ND61 904 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 OR10T2Q8NGX3 314 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 BCL7CQ8WUZ0 217 aaPredicted RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 SLC35F5Q8WV83 523 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 ATRIPQ8WXE1 791 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 SMARCD1Q96GM5 515 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PCED1BQ96HM7 432 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 FUBP3Q96I24 572 aaKnown RBP eCLIP8.09□□□□□ -1.11
TDP1-209ENST00000554180 HSFY1Q96LI6 401 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 C11orf70Q9BRQ4 267 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 ZBED2Q9BTP6 218 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 HERC2P3Q9BVR0 1158 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 DUSP16Q9BY84 665 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 GPR62Q9BZJ7 368 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 UBXN6Q9BZV1 441 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 ZCWPW1Q9H0M4 648 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 MRPL47Q9HD33 250 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 ABCB6Q9NP58 842 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PNPLA8Q9NP80 782 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 CHST7Q9NS84 486 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 PARVAQ9NVD7 372 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 SPG21Q9NZD8 308 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 CTTNBP2NLQ9P2B4 639 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 TRIM10Q9UDY6 481 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 CNOT8Q9UFF9 292 aaKnown RBP8.09□□□□□ -1.11
TDP1-209ENST00000554180 PCDHB12Q9Y5F1 795 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 BACE2Q9Y5Z0 518 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
TDP1-209ENST00000554180 MYBPHLA2RUH7 354 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 NT5C1B-RDH14C9J2C7 533 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TLL1O43897 1013 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 TBC1D4O60343 1298 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ATP2C2O75185 946 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 ABL1P00519 1130 aa8.08□□□□□ -1.12
TDP1-209ENST00000554180 LINC00271P0C7V0 271 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms