RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 SLC7A6OSQ96CW6 309 aaPredicted RBP7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CDHR1Q96JP9 859 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 PLCD4Q9BRC7 762 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 RAB6CQ9H0N0 254 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 XYLT2Q9H1B5 865 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 CYLDQ9NQC7 956 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 SLC17A7Q9P2U7 560 aa7.29□□□□□ -1.24
LINC-ROR-201ENST00000553704 IGKV6D-21A0A0A0MT36 114 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CST8O60676 142 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 FARP2O94887 1054 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 LDHAP00338 332 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 GJB1P08034 283 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 HOXC6P09630 235 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PSMA2P25787 234 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 GBP2P32456 591 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 RPL22P35268 128 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 SKIV2L2P42285 1042 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 OAZ1P54368 228 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 OSTNP61366 133 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 TFAMQ00059 246 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 OVGP1Q12889 678 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NR1H3Q13133 447 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 RHPN2Q8IUC4 686 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 IGDCC3Q8IVU1 814 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 TMEM192Q8IY95 271 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRRC71Q8N4P6 559 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF276Q8N554 614 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NIPA2Q8N8Q9 360 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NAT8LQ8N9F0 302 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 TMEM35BQ8NCS4 154 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 FBXO36Q8NEA4 188 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CCHCR1Q8TD31 782 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRRC8CQ8TDW0 803 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PRPF31Q8WWY3 499 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PTPRN2Q92932 1015 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 GRAMD1AQ96CP6 724 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PRR11Q96HE9 360 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 TWNKQ96RR1 684 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PAFAH2Q99487 392 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NIFKQ9BYG3 293 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 IMPG2Q9BZV3 1241 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 LRMDAQ9H2I8 198 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 R3HDMLQ9H3Y0 253 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 ALG13Q9NP73 1137 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NPHS2Q9NP85 383 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 STK32BQ9NY57 414 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NOP53Q9NZM5 478 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 SMG5Q9UPR3 1016 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 DRG1Q9Y295 367 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 USH1CQ9Y6N9 552 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PCNTO95613 3336 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NFKBIEO00221 500 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 B4GALT5O43286 388 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 ERBB2P04626 1255 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 MARK3P27448 753 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 EPHB2P29323 1055 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CDH5P33151 784 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CETN2P41208 172 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 GMPSP49915 693 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 GEMIN4P57678 1058 aaKnown RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF699Q32M78 642 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 NPNTQ6UXI9 565 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 VSIG1Q86XK7 387 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 AGGF1Q8N302 714 aaeCLIP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 RFWD2Q8NHY2 731 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 DCAKDQ8WVC6 231 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 ZNF75CPQ92670 426 aaPredicted RBP7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 C12orf42Q96LP6 360 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CPXM1Q96SM3 734 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 DHRS4Q9BTZ2 278 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 SDCBP2Q9H190 292 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 TXLNGQ9NUQ3 528 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 PCSK1NQ9UHG2 260 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 AGTPBP1Q9UPW5 1226 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 CHMP2BQ9UQN3 213 aa7.28□□□□□ -1.24
LINC-ROR-201ENST00000553704 MCM3APO60318 1980 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PEX11AO75192 247 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 STAM2O75886 525 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 SRGAP2CP0DJJ0 459 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CD19P15391 556 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CCND1P24385 295 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 ICAM3P32942 547 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CDH8P55286 799 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 LACTBP83111 547 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PIGHQ14442 188 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TAF1BQ53T94 588 aaPredicted RBP7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 HHATQ5VTY9 493 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 EEF1DP3Q658K8 133 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 CATSPERGQ6ZRH7 1159 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 BBS12Q6ZW61 710 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 EEPD1Q7L9B9 569 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 RPAINQ86UA6 219 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PPIL6Q8IXY8 311 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 FAM13CQ8NE31 585 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TCP10LQ8TDR4 215 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 TRAPPC12Q8WVT3 735 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 LRRC37BQ96QE4 947 aa7.27□□□□□ -1.25
LINC-ROR-201ENST00000553704 PEBP4Q96S96 227 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms