RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 GTSE1Q9NYZ3 720 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 HSFX1Q9UBD0 423 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 HMGXB4Q9UGU5 601 aa19.51■□□□□ 0.71
SHMT2-206ENST00000553529 C4BPAP04003 597 aaKnown RBP19.5■□□□□ 0.71
SHMT2-206ENST00000553529 WARSP23381 471 aaKnown RBP19.5■□□□□ 0.71
SHMT2-206ENST00000553529 CYP27A1Q02318 531 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 BIRC3Q13489 604 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 TRIM68Q6AZZ1 485 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 TXNDC11Q6PKC3 985 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 TSSK4Q6SA08 328 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 ITIH5Q86UX2 942 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 SPATA2LQ8IUW3 424 aaPredicted RBP19.5■□□□□ 0.71
SHMT2-206ENST00000553529 MFSD6LQ8IWD5 586 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 OR6B3Q8NGW1 331 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 C2orf15Q8WU43 125 aaKnown RBP19.5■□□□□ 0.71
SHMT2-206ENST00000553529 CYP2S1Q96SQ9 504 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 SCAND2PQ9GZW5 306 aaPredicted RBP19.5■□□□□ 0.71
SHMT2-206ENST00000553529 ASB3Q9Y575 518 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 PIAS3Q9Y6X2 628 aa19.5■□□□□ 0.71
SHMT2-206ENST00000553529 AKAP3O75969 853 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 RHOBTB3O94955 611 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 CCNE1P24864 410 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 LHX1P48742 406 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 PRKCQQ04759 706 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 TAF12Q16514 161 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 NAIF1Q69YI7 327 aaPredicted RBP19.49■□□□□ 0.71
SHMT2-206ENST00000553529 FMR1NBQ8N0W7 255 aaPredicted RBP19.49■□□□□ 0.71
SHMT2-206ENST00000553529 TTC16Q8NEE8 873 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 USP13Q92995 863 aaPredicted RBP19.49■□□□□ 0.71
SHMT2-206ENST00000553529 ZNF518BQ9C0D4 1074 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 TASP1Q9H6P5 420 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 MMRN2Q9H8L6 949 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 RBM12Q9NTZ6 932 aaKnown RBP19.49■□□□□ 0.71
SHMT2-206ENST00000553529 USP25Q9UHP3 1055 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 ANAPC1Q9H1A4 1944 aa19.49■□□□□ 0.71
SHMT2-206ENST00000553529 C2orf78A6NCI8 922 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 OTOL1A6NHN0 477 aaPredicted RBP19.48■□□□□ 0.71
SHMT2-206ENST00000553529 ZNF263O14978 683 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 PHACTR2O75167 634 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 CLSTN1O94985 981 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 PFKPQ01813 784 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 PSMD2Q13200 908 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 TRPC3Q13507 836 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 NFE2Q16621 373 aaPredicted RBP19.48■□□□□ 0.71
SHMT2-206ENST00000553529 CHFRQ96EP1 664 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 TRPC7Q9HCX4 862 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 C2orf42Q9NWW7 574 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 CDH9Q9ULB4 789 aa19.48■□□□□ 0.71
SHMT2-206ENST00000553529 VPS13AQ96RL7 3174 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 PDXKO00764 312 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 SCAMP3O14828 347 aaKnown RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 GFRA3O60609 400 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 NOL4O94818 638 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 PCSK1P29120 753 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 GNL1P36915 607 aaPredicted RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 NBL1P41271 181 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 PMS1P54277 932 aaKnown RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 SNRPFP62306 86 aaKnown RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 TNNC1P63316 161 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 CLDN10P78369 228 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 PPP3CAQ08209 521 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 FCHO2Q0JRZ9 810 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 NCOA4Q13772 614 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 ZNF699Q32M78 642 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 ISM2Q6H9L7 571 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 CMTM8Q8IZV2 173 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 ENGASEQ8NFI3 743 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 DNASE1L2Q92874 299 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 B3GNT5Q9BYG0 378 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 SNX25Q9H3E2 840 aa19.47■□□□□ 0.71
SHMT2-206ENST00000553529 SPATA6Q9NWH7 488 aaPredicted RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 R3HCC1Q9Y3T6 440 aaKnown RBP19.47■□□□□ 0.71
SHMT2-206ENST00000553529 GADD45BO75293 160 aaPredicted RBP19.46■□□□□ 0.71
SHMT2-206ENST00000553529 SP9P0CG40 484 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ARSAP15289 507 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 NR2F2P24468 414 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 CDC25CP30307 473 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 NUBP1P53384 320 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ZXDBP98169 803 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 SMARCB1Q12824 385 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 IFRD2Q12894 506 aaPredicted RBP19.46■□□□□ 0.71
SHMT2-206ENST00000553529 GAS6Q14393 721 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 BECN1Q14457 450 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 CFAP221Q4G0U5 840 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ZCWPW2Q504Y3 356 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ARHGAP15Q53QZ3 475 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 DPH6Q7L8W6 267 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 SLC9A9Q8IVB4 645 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 C1orf210Q8IVY1 113 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 DEPDC1BQ8WUY9 529 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 IRF7Q92985 503 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 SHDQ96IW2 340 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 APOBEC3GQ9HC16 384 aaKnown RBP19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ABCB6Q9NP58 842 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 HPS4Q9NQG7 708 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 CGNQ9P2M7 1197 aaKnown RBP19.46■□□□□ 0.71
SHMT2-206ENST00000553529 MAGEC2Q9UBF1 373 aaPredicted RBP19.46■□□□□ 0.71
SHMT2-206ENST00000553529 TRAF3IP3Q9Y228 551 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ATP6V1DQ9Y5K8 247 aa19.46■□□□□ 0.71
SHMT2-206ENST00000553529 ZNF638Q14966 1978 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms