RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SLC27A5Q9Y2P5 690 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 NFE2L3Q9Y4A8 694 aa12.49□□□□□ -0.41
TRAFD1-209ENST00000552896 LRRN2O75325 713 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 CILPO75339 1184 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 SOAT2O75908 522 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 FGF19O95750 216 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 PTPN2P17706 415 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 PTPN1P18031 435 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 TBXAS1P24557 533 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 MTIF2P46199 727 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 NDST1P52848 882 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 RPL10AP62906 217 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 NTHL1P78549 312 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 MAN2A1Q16706 1144 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 VSTM1Q6UX27 236 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 ZDHHC14Q8IZN3 488 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 CEP295NLQ96MC4 621 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 ZNF512Q96ME7 567 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 NT5C1BQ96P26 610 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 ARID3AQ99856 593 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 CORO1BQ9BR76 489 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 ELOVL4Q9GZR5 314 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 EPS15L1Q9UBC2 864 aa12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 ZFP37Q9Y6Q3 630 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-209ENST00000552896 GTPBP10A4D1E9 387 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 KCNJ18B7U540 433 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 TNFRSF10AO00220 468 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 ZNF197O14709 1029 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 TRIM66O15016 1216 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 MICAL2O94851 1124 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 LETM1O95202 739 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CD58P19256 250 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CYP2F1P24903 491 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 EEF1GP26641 437 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 YWHAEP62258 255 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 MYL5Q02045 173 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CYP27A1Q02318 531 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CUL2Q13617 745 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 KCNJ12Q14500 433 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 SLC5A9Q2M3M2 681 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 SKOR2Q2VWA4 1001 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 PRSS36Q5K4E3 855 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CDKAL1Q5VV42 579 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CRYBG2Q8N1P7 616 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 LMO3Q8TAP4 145 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 LPIN3Q9BQK8 851 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 NT5C1AQ9BXI3 368 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 INTS2Q9H0H0 1204 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CD320Q9NPF0 282 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 COL4A2P08572 1712 aa12.47□□□□□ -0.41
TRAFD1-209ENST00000552896 BDNFP23560 247 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 GBP2P32456 591 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 CDR1P51861 262 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 GCNT1Q02742 428 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TCP11X2Q5H9J9 407 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 CYP4A22Q5TCH4 519 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 ACOT1Q86TX2 421 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM35AQ86V20 835 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 NPAS3Q8IXF0 933 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 UBR7Q8N806 425 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 WHAMMQ8TF30 809 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TATDN2Q93075 761 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 SMARCD1Q96GM5 515 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 SPATA17Q96L03 361 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TWNKQ96RR1 684 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 MYADMQ96S97 322 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 BPIFA3Q9BQP9 254 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TUBGCP2Q9BSJ2 902 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 LRRC3Q9BY71 257 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 B3GNT5Q9BYG0 378 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 NAT10Q9H0A0 1025 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 CISHQ9NSE2 258 aa12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 SAMSN1Q9NSI8 373 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 MRPS23Q9Y3D9 190 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-209ENST00000552896 TICRRQ7Z2Z1 1910 aa12.46□□□□□ -0.42
TRAFD1-209ENST00000552896 NOL4O94818 638 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 CSH1P0DML2 217 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 CSH2P0DML3 217 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 CEBPBP17676 345 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 ANXA13P27216 316 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 CCR2P41597 374 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 GPR15P49685 360 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 ORC1Q13415 861 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 ANO6Q4KMQ2 910 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 HSP90AA4PQ58FG1 418 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 MIIPQ5JXC2 388 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 TRIM65Q6PJ69 517 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms