RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 AP1G2O75843 785 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 MAPTP10636 758 aaKnown RBP11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 KDSRQ06136 332 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 ACVR2BQ13705 512 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 NEUROG2Q9H2A3 272 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 ZNF536O15090 1300 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 LPXNO60711 386 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 DIAPH2O60879 1101 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 TCF4P15884 667 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 HSPA6P17066 643 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 MLH1P40692 756 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 GLRBP48167 497 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 CCL14Q16627 93 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 JOSD2Q8TAC2 188 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 ROBO3Q96MS0 1386 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 MFSD14CQ5VZR4 134 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 BTBD8Q5XKL5 378 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 LRRC34Q8IZ02 419 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 DTX3LQ8TDB6 740 aa11.29□□□□□ -0.6
TGFBR1-209ENST00000552516 UBA6A0AVT1 1052 aaPredicted RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 BUD23O43709 281 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 AMPD1P23109 780 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CHKAP35790 457 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 PEX19P40855 299 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 TPI1P60174 286 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ADIGQ0VDE8 80 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ZC3H12AQ5D1E8 599 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CARD9Q9H257 536 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CPSF2Q9P2I0 782 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ZC3H7BQ9UGR2 993 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CPSF3Q9UKF6 684 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 NUP98P52948 1817 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 KCNA2P16389 499 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 KRT4P19013 534 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ISLR2Q6UXK2 745 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CCT6BQ92526 530 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CDKL2Q92772 493 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SYN2Q92777 582 aaPredicted RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CDT1Q9H211 546 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 PHRF1Q9P1Y6 1649 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 MYO5AQ9Y4I1 1855 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 KRT34O76011 436 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 AMPD2Q01433 879 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ACCSLQ4AC99 568 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SH3PXD2AQ5TCZ1 1133 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 NOTUMQ6P988 496 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 USP18Q9UMW8 372 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 BTBD19C9JJ37 291 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 MICAL2O94851 1124 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 GPD1P21695 349 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ANXA13P27216 316 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SERPINB6P35237 376 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 HSD17B4P51659 736 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 GTF2A2P52657 109 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ATXN1P54253 815 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ZCWPW2Q504Y3 356 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 PLEKHO2Q8TD55 490 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 FAM167BQ9BTA0 163 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 SMPD4Q9NXE4 827 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 A8MX80 341 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 STAMBPO95630 424 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 GTF2BQ00403 316 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 TFDP2Q14188 446 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 TMEM176AQ96HP8 235 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ETNK1Q9HBU6 452 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 KRT82Q9NSB4 513 aa11.28□□□□□ -0.6
TGFBR1-209ENST00000552516 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 WEE1P30291 646 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 SCNN1GP51170 649 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 THOC5Q13769 683 aaKnown RBP11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 RPS6KA2Q15349 733 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 CACUL1Q86Y37 369 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 EFHBQ8N7U6 833 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 MINDY3Q9H8M7 445 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 CITO14578 2027 aa11.27□□□□□ -0.6
TGFBR1-209ENST00000552516 GARTP22102 1010 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 PBX3P40426 434 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 ALDH18A1P54886 795 aaKnown RBP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 TSPY1Q01534 308 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 FBXO36Q8NEA4 188 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 CHMP6Q96FZ7 201 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms