RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 ATG16L1Q676U5 607 aa12.19□□□□□ -0.46
LGR5-206ENST00000550851 TRMT10CQ7L0Y3 403 aaKnown RBP12.19□□□□□ -0.46
LGR5-206ENST00000550851 RAB44Q7Z6P3 723 aaPredicted RBP12.19□□□□□ -0.46
LGR5-206ENST00000550851 ADAM32Q8TC27 787 aa12.19□□□□□ -0.46
LGR5-206ENST00000550851 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
LGR5-206ENST00000550851 EDEM1Q92611 657 aa12.19□□□□□ -0.46
LGR5-206ENST00000550851 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.19□□□□□ -0.462e-10■■■■■ 34
LGR5-206ENST00000550851 MARCOQ9UEW3 520 aaPredicted RBP12.19□□□□□ -0.46
LGR5-206ENST00000550851 USP18Q9UMW8 372 aa12.19□□□□□ -0.46
LGR5-206ENST00000550851 KLRG2A4D1S0 409 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 MANSC4A6NHS7 340 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 MAPK13O15264 365 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 MCF2P10911 925 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 RECQLP46063 649 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 MDH1BQ5I0G3 518 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 SH2D4BQ5SQS7 431 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 TRIM67Q6ZTA4 783 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 CLEC4DQ8WXI8 215 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
LGR5-206ENST00000550851 BSNDQ8WZ55 320 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 XPNPEP3Q9NQH7 507 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 C3orf70A6NLC5 250 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 RPSAP08865 295 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 IRF1P10914 325 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 AKR1A1P14550 325 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 PAMP19021 973 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 EIF4BP23588 611 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 NFIL3Q16649 462 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 HABP4Q5JVS0 413 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 TDRD10Q5VZ19 366 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 LLGL2Q6P1M3 1020 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 GPR142Q7Z601 462 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 LNX1Q8TBB1 728 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 EPS8L3Q8TE67 593 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 CCT8L2Q96SF2 557 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 TRIM56Q9BRZ2 755 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 CEP41Q9BYV8 373 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 CDT1Q9H211 546 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 SMYD3Q9H7B4 428 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 STARD7Q9NQZ5 370 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 A0A0A6YYK5 440 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 TMEM120BA0PK00 339 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 H0Y3Z8 333 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 FAM153BP0C7A2 387 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 MX2P20592 715 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 ETFBP38117 255 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 FNTAP49354 379 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 PSEN2P49810 448 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 CLNS1AP54105 237 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
LGR5-206ENST00000550851 FAM153CQ494X1 144 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 C10orf120Q5SQS8 335 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 MFSD7Q6UXD7 560 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 SYDE1Q6ZW31 735 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 DEFB128Q7Z7B8 93 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 SIAH1Q8IUQ4 282 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 LBHD1Q9BQE6 289 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 CNPY3Q9BT09 278 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 SEMA4AQ9H3S1 761 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 ASB7Q9H672 318 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 WDCPQ9H6R7 721 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 C10orf88Q9H8K7 445 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 FAM153AQ9UHL3 310 aa12.18□□□□□ -0.46
LGR5-206ENST00000550851 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 BAZ2AQ9UIF9 1905 aaKnown RBP12.18□□□□□ -0.46
LGR5-206ENST00000550851 ZBTB24O43167 697 aaPredicted RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 PLA2G6O60733 806 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 PBX1P40424 430 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 MARCKSL1P49006 195 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 IRAK1P51617 712 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 CD302Q8IX05 232 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 ATPAF2Q8N5M1 289 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 PGLYRP2Q96PD5 576 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 KRT82Q9NSB4 513 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 DDX43Q9NXZ2 648 aaKnown RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 PAK5Q9P286 719 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 SAE1Q9UBE0 346 aaPredicted RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 H3BQF6 201 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 DIAPH2O60879 1101 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 PMPCBO75439 489 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 RARAP10276 462 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 BCAT1P54687 386 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 COPS2P61201 443 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 OCRLQ01968 901 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
LGR5-206ENST00000550851 IQSEC1Q6DN90 963 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 KLC3Q6P597 504 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 CHSY1Q86X52 802 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 PPP1R36Q96LQ0 422 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 PIDD1Q9HB75 910 aa12.17□□□□□ -0.46
LGR5-206ENST00000550851 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms