RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MRI1Q9BV20 369 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 BCO1Q9HAY6 547 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 GALNT9Q9HCQ5 603 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 MED4Q9NPJ6 270 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 CASS4Q9NQ75 786 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 A1CFQ9NQ94 594 aaKnown RBP3.71□□□□□ -1.82
CCNT1-203ENST00000550457 PDRG1Q9NUG6 133 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 RBM28Q9NW13 759 aaKnown RBP3.71□□□□□ -1.82
CCNT1-203ENST00000550457 FANCLQ9NW38 375 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 DACT1Q9NYF0 836 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 DONSONQ9NYP3 566 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 RNF7Q9UBF6 113 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 POLKQ9UBT6 870 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 SNX14Q9Y5W7 946 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 GLI2P10070 1586 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 FRMPD1Q5SYB0 1578 aa3.71□□□□□ -1.82
CCNT1-203ENST00000550457 USP42Q9H9J4 1324 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 YTHDC2Q9H6S0 1430 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ZCCHC11Q5TAX3 1644 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CFAP65Q6ZU64 1925 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 A0A087WUV0 522 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CGB1A6NKQ9 187 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 GSG1L2A8MUP6 293 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 MAP2K7O14733 419 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 KINO60870 393 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 PHF2O75151 1096 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ZFPL1O95159 310 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 GCSHP23434 173 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 MCM3P25205 808 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SREBF1P36956 1147 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 AK2P54819 239 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 PROK1P58294 105 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CCT2P78371 535 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 MRPS35P82673 323 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CDK17Q00537 523 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SETQ01105 290 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SP140Q13342 867 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 KRT32Q14532 448 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 FSCN1Q16658 493 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CYP2A13Q16696 494 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 DALRD3Q5D0E6 543 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 RRP12Q5JTH9 1297 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CCDC73Q6ZRK6 1079 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 BHLHA9Q7RTU4 235 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SPATS2Q86XZ4 545 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ERC1Q8IUD2 1116 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 C8orf58Q8NAV2 365 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 GPR156Q8NFN8 814 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 CTCFLQ8NI51 663 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ACTRT2Q8TDY3 377 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 OTUD7AQ8TE49 926 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 STAG1Q8WVM7 1258 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SREK1Q8WXA9 508 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 STON2Q8WXE9 905 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 DNAAF4Q8WXU2 420 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 HOXB13Q92826 284 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 SECISBP2LQ93073 1101 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 GPATCH3Q96I76 525 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 PAWRQ96IZ0 340 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 PPP1R13BQ96KQ4 1090 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ZNF396Q96N95 335 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 LLPHQ9BRT6 129 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 UPF3BQ9BZI7 483 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 LSG1Q9H089 658 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 RNPEPQ9H4A4 650 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 VIPAS39Q9H9C1 493 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 UNKLQ9H9P5 680 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 IL17RBQ9NRM6 502 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 TBCCD1Q9NVR7 557 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 FBXO34Q9NWN3 711 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 BABAM1Q9NWV8 329 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 HMG20BQ9P0W2 317 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 NRBP1Q9UHY1 535 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ADAM21Q9UKJ8 722 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 A0A1W2PP64 1363 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ZC3H13Q5T200 1668 aaKnown RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ARHGEF17Q96PE2 2063 aaPredicted RBP3.7□□□□□ -1.82
CCNT1-203ENST00000550457 ZFYVE16Q7Z3T8 1539 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 RIMS2Q9UQ26 1411 aa3.7□□□□□ -1.82
CCNT1-203ENST00000550457 QRICH2Q9H0J4 1663 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 UGGT1Q9NYU2 1555 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 MSH6P52701 1360 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 MAP3K5Q99683 1374 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 VPS37CA5D8V6 355 aaPredicted RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 TMCO5BA8MYB1 307 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 IKBKBO14920 756 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 BPIP17213 487 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ENPP1P22413 925 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 OAS2P29728 719 aaKnown RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ABCG1P45844 678 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 SATB1Q01826 763 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 UBXN2BQ14CS0 331 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 CAMK4Q16566 473 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 ATP13A4Q4VNC1 1196 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 HSP90B2PQ58FF3 399 aa3.69□□□□□ -1.82
CCNT1-203ENST00000550457 DNAJC21Q5F1R6 531 aaKnown RBP3.69□□□□□ -1.82
CCNT1-203ENST00000550457 GORABQ5T7V8 394 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms