RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 NDST4Q9H3R1 872 aa12.69□□□□□ -0.38
PFDN5-208ENST00000549995 CSNK1G1Q9HCP0 422 aa12.69□□□□□ -0.38
PFDN5-208ENST00000549995 CISHQ9NSE2 258 aa12.69□□□□□ -0.38
PFDN5-208ENST00000549995 EPS15L1Q9UBC2 864 aa12.69□□□□□ -0.38
PFDN5-208ENST00000549995 LIMA1Q9UHB6 759 aaKnown RBP12.69□□□□□ -0.38
PFDN5-208ENST00000549995 ZFP37Q9Y6Q3 630 aaPredicted RBP12.69□□□□□ -0.38
PFDN5-208ENST00000549995 COL4A2P08572 1712 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 MOSPD3O75425 235 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 WEE2P0C1S8 567 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 PTPN2P17706 415 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 ZNF132P52740 706 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 YWHAEP62258 255 aaKnown RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 IQCB1Q15051 598 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 ZSCAN23Q3MJ62 389 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 VWA3BQ502W6 1294 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 TRIM65Q6PJ69 517 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 ITIH5Q86UX2 942 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 FUKQ8N0W3 1084 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 FAM81BQ96LP2 452 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 ARID3AQ99856 593 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 NT5C1AQ9BXI3 368 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 INTS2Q9H0H0 1204 aaKnown RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 GCNT4Q9P109 453 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 MAGEC2Q9UBF1 373 aaPredicted RBP12.68□□□□□ -0.38
PFDN5-208ENST00000549995 NR2E1Q9Y466 385 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 MYO16Q9Y6X6 1858 aa12.68□□□□□ -0.38
PFDN5-208ENST00000549995 MYH10P35580 1976 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SYCE3A1L190 88 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SOBPA7XYQ1 873 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 RHOP08100 348 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 PDGFRBP09619 1106 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 HMGA1P17096 107 aaKnown RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 CYP2F1P24903 491 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 WEE1P30291 646 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ALDH1A3P47895 512 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 RAD23BP54727 409 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 EPHB3P54753 998 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 KRT31Q15323 416 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SLC5A9Q2M3M2 681 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 PABPC1LQ4VXU2 614 aaKnown RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ARHGAP17Q68EM7 881 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 GBP6Q6ZN66 633 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ENOSF1Q7L5Y1 443 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 OTOP3Q7RTS5 596 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 GRASPQ7Z6J2 395 aaPredicted RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 FAM35AQ86V20 835 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ELMOD1Q8N336 334 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SLC4A11Q8NBS3 891 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 KREMEN1Q96MU8 473 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 HNRNPABQ99729 332 aaKnown RBP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 IL21Q9HBE4 155 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 PNPLA8Q9NP80 782 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SIX2Q9NPC8 291 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 FANCLQ9NW38 375 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 HCFC1R1Q9NWW0 138 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.67□□□□□ -0.38
PFDN5-208ENST00000549995 IL37Q9NZH6 218 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 SLC27A5Q9Y2P5 690 aa12.67□□□□□ -0.38
PFDN5-208ENST00000549995 ATP8B3O60423 1300 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 FAM92AA1XBS5 289 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 C2CD4DB7Z1M9 353 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 TRIM66O15016 1216 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 FGF19O95750 216 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 CSH1P0DML2 217 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 CSH2P0DML3 217 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 PON1P27169 355 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 CCR2P41597 374 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 MEA1Q16626 185 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 EXOC3L4Q17RC7 722 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 IQCEQ6IPM2 695 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-208ENST00000549995 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 AOPEPQ8N6M6 819 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 SMARCD1Q96GM5 515 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 ZNF512Q96ME7 567 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-208ENST00000549995 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-208ENST00000549995 LPIN3Q9BQK8 851 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
PFDN5-208ENST00000549995 DNAI2Q9GZS0 605 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 PIDD1Q9HB75 910 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 CD320Q9NPF0 282 aa12.66□□□□□ -0.38
PFDN5-208ENST00000549995 ASAH2Q9NR71 780 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms