RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 INTS8Q75QN2 995 aaKnown RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 SV2AQ7L0J3 742 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 FAM186BQ8IYM0 893 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 DEPDC1BQ8WUY9 529 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 ERCC4Q92889 916 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 SMARCE1Q969G3 411 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 E2F7Q96AV8 911 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 MKNK1Q9BUB5 465 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 TRMT61BQ9BVS5 477 aaKnown RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 BRD9Q9H8M2 597 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 MAGEC2Q9UBF1 373 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 MAGED2Q9UNF1 606 aaPredicted RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 NME7Q9Y5B8 376 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 PCDHA5Q9Y5H7 936 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 ZNF638Q14966 1978 aaKnown RBP16.14■□□□□ 0.17
NR4A1-212ENST00000549102 COL4A3Q01955 1670 aa16.14■□□□□ 0.17
NR4A1-212ENST00000549102 TICRRQ7Z2Z1 1910 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 HEPACAM2A8MVW5 462 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 KRT13P13646 458 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 PSMC2P35998 433 aaKnown RBP16.13■□□□□ 0.17
NR4A1-212ENST00000549102 PRCPP42785 496 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 NLRP12P59046 1061 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 CYP27A1Q02318 531 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 PRKCQQ04759 706 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 ARID3BQ8IVW6 561 aaPredicted RBP16.13■□□□□ 0.17
NR4A1-212ENST00000549102 MFSD6LQ8IWD5 586 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 SCN4BQ8IWT1 228 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 MYCBPAPQ8TBZ2 947 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 DNASE1L2Q92874 299 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 PCED1BQ96HM7 432 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 TASP1Q9H6P5 420 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 SMYD3Q9H7B4 428 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 NCANO14594 1321 aa16.13■□□□□ 0.17
NR4A1-212ENST00000549102 COL4A2P08572 1712 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 SLC38A8A6NNN8 435 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 A8MXQ7 604 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 NOL4O94818 638 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 F11P03951 625 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 TRIM49P0CI25 452 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 TRIM49CP0CI26 452 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 BDNFP23560 247 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 GDI1P31150 447 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 PIK3CAP42336 1068 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 RAP1GAPP47736 663 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 ENPEPQ07075 957 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 SGSM1Q2NKQ1 1148 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 COBLL1Q53SF7 1204 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 VSTM1Q6UX27 236 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 TMEM150AQ86TG1 271 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 GPIHBP1Q8IV16 184 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 ELOA2Q8IYF1 753 aaPredicted RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 CCDC105Q8IYK2 499 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 TAF4BQ92750 862 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 IRF7Q92985 503 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 ELMO3Q96BJ8 720 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 RSPRY1Q96DX4 576 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 TRMT2BQ96GJ1 504 aaKnown RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 DDX23Q9BUQ8 820 aaKnown RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 GTPBP4Q9BZE4 634 aaKnown RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 FOXQ1Q9C009 403 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 DPEP3Q9H4B8 488 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 UXTQ9UBK9 157 aaPredicted RBP16.12■□□□□ 0.17
NR4A1-212ENST00000549102 ZMYM5Q9UJ78 669 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 SIT1Q9Y3P8 196 aa16.12■□□□□ 0.17
NR4A1-212ENST00000549102 KANSL1LA0AUZ9 987 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 DPYSL4O14531 572 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 ZNF263O14978 683 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 CETN3O15182 167 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
NR4A1-212ENST00000549102 HLA-DRAP01903 254 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 P4HA1P13674 534 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 PTPN1P18031 435 aaKnown RBP16.11■□□□□ 0.17
NR4A1-212ENST00000549102 WEE1P30291 646 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 GRIK1P39086 918 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 GCLMP48507 274 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 CDH8P55286 799 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 PPP3CAQ08209 521 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 TPRG1Q6ZUI0 275 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 YAF2Q8IY57 180 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 DTWD2Q8NBA8 298 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 B3GALNT2Q8NCR0 500 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 PJA1Q8NG27 643 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 MRPS31Q92665 395 aaKnown RBP16.11■□□□□ 0.17
NR4A1-212ENST00000549102 EEF2KMTQ96G04 330 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 MYRFLQ96LU7 910 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 TSG101Q99816 390 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 SLC46A2Q9BY10 475 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 IRF2BPLQ9H1B7 796 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 HEBP1Q9NRV9 189 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 ANAPC1Q9H1A4 1944 aa16.11■□□□□ 0.17
NR4A1-212ENST00000549102 H0Y858 1186 aa16.1■□□□□ 0.17
NR4A1-212ENST00000549102 TRIM66O15016 1216 aa16.1■□□□□ 0.17
NR4A1-212ENST00000549102 PRAMEF12O95522 483 aa16.1■□□□□ 0.17
NR4A1-212ENST00000549102 ASS1P00966 412 aaKnown RBP16.1■□□□□ 0.17
NR4A1-212ENST00000549102 DCNP07585 359 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms