RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.24■■□□□ 1.47
NPAS3-206ENST00000548645 PCDHB4Q9Y5E5 795 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 SMAPO00193 183 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 CIB2O75838 187 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 BGNP21810 368 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 DSG1Q02413 1049 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 SMC1BQ8NDV3 1235 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 SLC35B2Q8TB61 432 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 CPT1BQ92523 772 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 ZNF516Q92618 1163 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 FAM84AQ96KN4 292 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 FAM111AQ96PZ2 611 aa24.24■■□□□ 1.47
NPAS3-206ENST00000548645 TMEM191CA6NGB0 347 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 HLA-DRAP01903 254 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 TMEM191BP0C7N4 346 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 TSHRP16473 764 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 ACO1P21399 889 aaKnown RBP24.23■■□□□ 1.47
NPAS3-206ENST00000548645 NEK3P51956 506 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 TRMT5Q32P41 509 aaKnown RBP24.23■■□□□ 1.47
NPAS3-206ENST00000548645 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 CYTH2Q99418 400 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 NMUR2Q9GZQ4 415 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 DDX56Q9NY93 547 aaKnown RBP24.23■■□□□ 1.47
NPAS3-206ENST00000548645 ARMCX1Q9P291 453 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 KLRG2A4D1S0 409 aaPredicted RBP24.23■■□□□ 1.47
NPAS3-206ENST00000548645 E7ESA3 106 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 ANPEPP15144 967 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 GARTP22102 1010 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 GSTT1P30711 240 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 SSTR3P32745 418 aaPredicted RBP24.23■■□□□ 1.47
NPAS3-206ENST00000548645 GAD2Q05329 585 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 SPP2Q13103 211 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 ANKRD22Q5VYY1 191 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 TMEM270Q6UE05 265 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 NAT8LQ8N9F0 302 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 ARHGEF4Q9NR80 690 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 IKBKGQ9Y6K9 419 aa24.23■■□□□ 1.47
NPAS3-206ENST00000548645 HNRNPDLO14979 420 aaKnown RBP24.22■■□□□ 1.47
NPAS3-206ENST00000548645 UGCGQ16739 394 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 RASIP1Q5U651 963 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 ANKEF1Q9NU02 776 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 PCMTD2Q9NV79 361 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 DNAJB4Q9UDY4 337 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 STRIP2Q9ULQ0 834 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 TMX2Q9Y320 296 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.22■■□□□ 1.47
NPAS3-206ENST00000548645 CDKN2BP42772 138 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 PSMC5P62195 406 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 AP2B1P63010 937 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 TKFCQ3LXA3 575 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 PLA2G4FQ68DD2 849 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 IZUMO2Q6UXV1 221 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 RFX8Q6ZV50 586 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 SCUBE1Q8IWY4 988 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 PDIK1LQ8N165 341 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 DRAXINQ8NBI3 349 aaPredicted RBP24.22■■□□□ 1.47
NPAS3-206ENST00000548645 SPIRE2Q8WWL2 714 aa24.22■■□□□ 1.47
NPAS3-206ENST00000548645 C2orf71A6NGG8 1288 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 H3BRJ5 948 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 ZACNQ401N2 412 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 SAMD1Q6SPF0 538 aaPredicted RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 ACER1Q8TDN7 264 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 DTNBP1Q96EV8 351 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 FNBP1Q96RU3 617 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 TMX4Q9H1E5 349 aaPredicted RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 TBC1D22BQ9NU19 505 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 NDE1Q9NXR1 346 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 KCNK4Q9NYG8 393 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 FAM237BA0A1B0GVD1 139 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 KLF11O14901 512 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 CPA2P48052 419 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 SLC18A2Q05940 514 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 PTK7Q13308 1070 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 CUL2Q13617 745 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 BBS9Q3SYG4 887 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 AZIN2Q96A70 460 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 NTPCRQ9BSD7 190 aaKnown RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 VCX3BQ9H321 246 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 VCX3AQ9NNX9 186 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 GINM1Q9NU53 330 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 ZCCHC18P0CG32 403 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 TNNI1P19237 187 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 LMBRD2Q68DH5 695 aaPredicted RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 SPOPLQ6IQ16 392 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 ARHGAP22Q7Z5H3 698 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 DDX50Q9BQ39 737 aaKnown RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 ECSITQ9BQ95 431 aa24.21■■□□□ 1.47
NPAS3-206ENST00000548645 WDR83Q9BRX9 315 aaKnown RBP24.21■■□□□ 1.47
NPAS3-206ENST00000548645 F8VP50 259 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 HSD17B4P51659 736 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 ALYREFQ86V81 257 aaKnown RBP24.2■■□□□ 1.46
NPAS3-206ENST00000548645 EPAS1Q99814 870 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 DEFB129Q9H1M3 183 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 ZNRF3Q9ULT6 936 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 TM7SF2O76062 418 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 ENO1P06733 434 aaKnown RBP24.2■■□□□ 1.46
NPAS3-206ENST00000548645 MMP8P22894 467 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 RIPOR1Q6ZS17 1223 aa24.2■■□□□ 1.46
NPAS3-206ENST00000548645 MYLK4Q86YV6 388 aaPredicted RBP24.2■■□□□ 1.46
NPAS3-206ENST00000548645 IL31RAQ8NI17 732 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms