RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 USP49Q70CQ1 688 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 ZNF720Q7Z2F6 126 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 CSGALNACT2Q8N6G5 542 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 ARL14EPQ8N8R7 260 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 DDX1Q92499 740 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 EPSTI1Q96J88 318 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 SLC22A12Q96S37 553 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 TPSD1Q9BZJ3 242 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 LINC00597Q9H2U6 94 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 L1RE1Q9UN81 338 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 SMC3Q9UQE7 1217 aa12.86□□□□□ -0.35
TRAFD1-205ENST00000548277 TM4SF5O14894 197 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 FOXD2O60548 495 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 HUS1O60921 280 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 ATP2C2O75185 946 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 DRD1P21728 446 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 DDX6P26196 483 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 ADSSP30520 456 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 IFNAR2P48551 515 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 AMPD2Q01433 879 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 DMC1Q14565 340 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 MTF1Q14872 753 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 LMBRD2Q68DH5 695 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 OSTM1Q86WC4 334 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 CPA6Q8N4T0 437 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 KCNN1Q92952 543 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 CD101Q93033 1021 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 ZNF560Q96MR9 790 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 DUSP15Q9H1R2 295 aaPredicted RBP12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 SNX9Q9Y5X1 595 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 STYXL1Q9Y6J8 313 aa12.85□□□□□ -0.35
TRAFD1-205ENST00000548277 C2orf78A6NCI8 922 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 GIPC1O14908 333 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 TADA3O75528 432 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 IL18RAPO95256 599 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 KCNK5O95279 499 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CAVIN2O95810 425 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CKMP06732 381 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 LONP1P36776 959 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 LIMK1P53667 647 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 MYL7Q01449 175 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 POSTNQ15063 836 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 PDGFRLQ15198 375 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 NFE2Q16621 373 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 C2orf27AQ580R0 203 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 PSAPL1Q6NUJ1 521 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 SPATA2LQ8IUW3 424 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 SYCP3Q8IZU3 236 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CAMKK1Q8N5S9 505 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 C1orf127Q8N9H9 656 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CACTINQ8WUQ7 758 aaKnown RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 EZH1Q92800 747 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 KIF9Q9HAQ2 790 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 PDE11AQ9HCR9 933 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 VPS45Q9NRW7 570 aa12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
TRAFD1-205ENST00000548277 TRAV19A0A0A6YYK7 116 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 MYMKA6NI61 221 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 C4orf47A7E2U8 309 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 SLC26A4O43511 780 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 RHOBTB1O94844 696 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 GCNT3O95395 438 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 USP17L7P0C7H9 530 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 IDEP14735 1019 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 HDCP19113 662 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 SCP2P22307 547 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 PMLP29590 882 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 PNPLA4P41247 253 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 CEBPZQ03701 1054 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 FAM160A1Q05DH4 1040 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ELF2Q15723 593 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 INTS6LQ5JSJ4 861 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 SH3RF2Q8TEC5 729 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 OSCP1Q8WVF1 389 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ACCSQ96QU6 501 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 EDEM2Q9BV94 578 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 LSM14BQ9BX40 385 aaKnown RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 RBAKQ9NYW8 714 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 UXTQ9UBK9 157 aaPredicted RBP12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
TRAFD1-205ENST00000548277 ASCC3Q8N3C0 2202 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-205ENST00000548277 NOL4O94818 638 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms